RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	IGSF10	Q6WRI0	2623 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	APC2	O95996	2303 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	ACACA	Q13085	2346 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647		A0A087WV48	116 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647		A0A1W2PPC4	97 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	TRABD2B	A6NFA1	517 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	ACSL4	O60488	711 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	GABBR2	O75899	941 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	ASL	P04424	464 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	IGHV4-34	P06331	123 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	CDK4	P11802	303 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	CD70	P32970	193 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	CCT8	P50990	548 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	FKBP3	Q00688	224 aa	Known RBP	11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	OCLN	Q16625	522 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	COL28A1	Q2UY09	1125 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	FAM133B	Q5BKY9	247 aa	Known RBP	11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	KCNT1	Q5JUK3	1230 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	KIAA0895L	Q68EN5	471 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	C19orf48	Q6RUI8	117 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	CACUL1	Q86Y37	369 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	SCUBE3	Q8IX30	993 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	UBA3	Q8TBC4	463 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	SNX19	Q92543	992 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	CCDC34	Q96HJ3	373 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	HSFY1	Q96LI6	401 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	DDX50	Q9BQ39	737 aa	Known RBP	11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	GTPBP4	Q9BZE4	634 aa	Known RBP	11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	PABPC3	Q9H361	631 aa	Known RBP	11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	ADAMTS1	Q9UHI8	967 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	TPX2	Q9ULW0	747 aa	Known RBP	11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	NCKAP1	Q9Y2A7	1128 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	RAX	Q9Y2V3	346 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	PCDHGA1	Q9Y5H4	931 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	CABIN1	Q9Y6J0	2220 aa		11.98	□□□□□ -0.49
CTNND1-238	ENST00000534647	MUC22	E2RYF6	1773 aa	Predicted RBP	11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	WDFY3	Q8IZQ1	3526 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647		A0A1B0GTQ1	180 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	TARSL2	A2RTX5	802 aa	Known RBP	11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647		H0Y8X5	98 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	MSI1	O43347	362 aa	Known RBP	11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	PRMT3	O60678	531 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	TBL1X	O60907	577 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	FSBP	O95073	299 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	C1S	P09871	688 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	CD19	P15391	556 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	SLC6A4	P31645	630 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	PRCP	P42785	496 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	RPL34	P49207	117 aa	Known RBP	11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	SGSH	P51688	502 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	GALC	P54803	685 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	NNT	Q13423	1086 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	STIL	Q15468	1287 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	INAVA	Q3KP66	663 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	DESI1	Q6ICB0	168 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	PMF1	Q6P1K2	205 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	RFWD3	Q6PCD5	774 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	BEND5	Q7L4P6	421 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	TMPRSS12	Q86WS5	348 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	ZNF366	Q8N895	744 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	PLPP7	Q8NBV4	271 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	HJURP	Q8NCD3	748 aa	Predicted RBP	11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	WFDC5	Q8TCV5	224 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	TFAP2B	Q92481	460 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	SLC35C1	Q96A29	364 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	SKA1	Q96BD8	255 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	MRGPRX3	Q96LB0	322 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	GSDMA	Q96QA5	445 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	ACE2	Q9BYF1	805 aa	Predicted RBP	11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	RMND1	Q9NWS8	449 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	HOOK1	Q9UJC3	728 aa	Known RBP	11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	FZD4	Q9ULV1	537 aa		11.97	□□□□□ -0.49
CTNND1-238	ENST00000534647	PTPRB	P23467	1997 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	GOLGA6L7	A0A1B0GV03	622 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	RNASEH1	O60930	286 aa	Known RBP	11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	FBXO21	O94952	628 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	LTF	P02788	710 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	SRPRA	P08240	638 aa	Known RBP	11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	CCR5	P51681	352 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	CLCN6	P51797	869 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	TBX4	P57082	545 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	ST8SIA6	P61647	398 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	LRRC63	Q05C16	580 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	CYP4F3	Q08477	520 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	C9orf64	Q5T6V5	341 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	TCERG1L	Q5VWI1	586 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	ANKRD40	Q6AI12	368 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	NADSYN1	Q6IA69	706 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	ZNF662	Q6ZS27	426 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	MFN1	Q8IWA4	741 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	SPATA20	Q8TB22	786 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	SLC39A13	Q96H72	371 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	TIGD1	Q96MW7	591 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms