RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 KBTBD4Q9NVX7 518 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 ANKMY1Q9P2S6 941 aa12.77□□□□□ -0.37
SVIP-205ENST00000533774 USP9YO00507 2555 aaPredicted RBP12.77□□□□□ -0.37
SVIP-205ENST00000533774 ZFC3H1O60293 1989 aaKnown RBP12.77□□□□□ -0.37
SVIP-205ENST00000533774 TBC1D3DA0A087WVF3 549 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 TBC1D3IA0A087WXS9 549 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 TBC1D3EA0A087X179 549 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 TBC1D3KA0A087X1G2 549 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 TBC1D3FA6NER0 549 aaPredicted RBP12.76□□□□□ -0.37
SVIP-205ENST00000533774 TBC1D3LB9A6J9 549 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 TULP2O00295 520 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 EXOC3O60645 756 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 HLA-DRAP01903 254 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 TBC1D3HP0C7X1 549 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 CKMT1AP12532 417 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 TXLNAP40222 546 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 CEBPZQ03701 1054 aaKnown RBP12.76□□□□□ -0.37
SVIP-205ENST00000533774 CLN3Q13286 438 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 ARID5BQ14865 1188 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 POM121L1PQ3SYA9 428 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 SLC45A4Q5BKX6 768 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 FAM133BQ5BKY9 247 aaKnown RBP12.76□□□□□ -0.37
SVIP-205ENST00000533774 PIK3R6Q5UE93 754 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 TBC1D3GQ6DHY5 549 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 TBC1D3CQ6IPX1 549 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 IGF2-ASQ6U949 168 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 CCDC81Q6ZN84 652 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 SND1Q7KZF4 910 aaKnown RBP eCLIP12.76□□□□□ -0.37
SVIP-205ENST00000533774 SV2AQ7L0J3 742 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 PIGZQ86VD9 579 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 TBC1D3Q8IZP1 549 aaPredicted RBP12.76□□□□□ -0.37
SVIP-205ENST00000533774 APOLD1Q96LR9 279 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 NT5C1AQ9BXI3 368 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 STARD5Q9NSY2 213 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 DACH1Q9UI36 760 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 CYTH4Q9UIA0 394 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 SLCO3A1Q9UIG8 710 aa12.76□□□□□ -0.37
SVIP-205ENST00000533774 HEMK1Q9Y5R4 338 aaPredicted RBP12.76□□□□□ -0.37
SVIP-205ENST00000533774 TEP1Q99973 2627 aaKnown RBP12.76□□□□□ -0.37
SVIP-205ENST00000533774 CDRT15L2A8MXV6 281 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 SUV39H1O43463 412 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 LZTS3O60299 673 aaPredicted RBP12.75□□□□□ -0.37
SVIP-205ENST00000533774 RNASEH1O60930 286 aaKnown RBP12.75□□□□□ -0.37
SVIP-205ENST00000533774 RTN2O75298 545 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 UBE4BO95155 1302 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 P4HA1P13674 534 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 VAV1P15498 845 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 CD58P19256 250 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 TGM2P21980 687 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 HARS2P49590 506 aaKnown RBP12.75□□□□□ -0.37
SVIP-205ENST00000533774 AP3M2P53677 418 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 SNRPFP62306 86 aaKnown RBP12.75□□□□□ -0.37
SVIP-205ENST00000533774 ASIC1P78348 528 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 SRSF6Q13247 344 aaKnown RBP12.75□□□□□ -0.37
SVIP-205ENST00000533774 ISXQ2M1V0 245 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 FSCBQ5H9T9 825 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 PM20D1Q6GTS8 502 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 ITIH6Q6UXX5 1313 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.75□□□□□ -0.37
SVIP-205ENST00000533774 IQCHQ86VS3 1027 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 EDEM1Q92611 657 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 PTPRN2Q92932 1015 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 FAM131CQ96AQ9 280 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 ATXN7L3BQ96GX2 97 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 PRICKLE1Q96MT3 831 aaPredicted RBP12.75□□□□□ -0.37
SVIP-205ENST00000533774 ULBP1Q9BZM6 244 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 TNMDQ9H2S6 317 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 DMAC2Q9NW81 257 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 STIM2Q9P246 746 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 ERVW-1Q9UQF0 538 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 HBS1LQ9Y450 684 aaKnown RBP12.75□□□□□ -0.37
SVIP-205ENST00000533774 MYO9AB2RTY4 2548 aa12.75□□□□□ -0.37
SVIP-205ENST00000533774 ICE1Q9Y2F5 2266 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 TARSL2A2RTX5 802 aaKnown RBP12.74□□□□□ -0.37
SVIP-205ENST00000533774 NTRK1P04629 796 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 RPN1P04843 607 aaKnown RBP12.74□□□□□ -0.37
SVIP-205ENST00000533774 CENPBP07199 599 aaPredicted RBP12.74□□□□□ -0.37
SVIP-205ENST00000533774 NUMBP49757 651 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 TKTL1P51854 596 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 ZNF394Q53GI3 561 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 NADSYN1Q6IA69 706 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 ARHGAP18Q8N392 663 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 FIBINQ8TAL6 211 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 TAF4BQ92750 862 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 SLC39A2Q9NP94 309 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 TFIP11Q9UBB9 837 aaKnown RBP12.74□□□□□ -0.37
SVIP-205ENST00000533774 TJP2Q9UDY2 1190 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 ENTPD2Q9Y5L3 495 aa12.74□□□□□ -0.37
SVIP-205ENST00000533774 NOTCH2Q04721 2471 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 UNC13CQ8NB66 2214 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 EDDM13A0A1B0GTR0 161 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 YJEFN3A6XGL0 299 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 E7ENQ6 273 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 PIAS2O75928 621 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 LATS1O95835 1130 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 ZBED1O96006 694 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 SLFN14P0C7P3 912 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 C5AR1P21730 350 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 MZF1P28698 734 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms