RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 RAB41Q5JT25 222 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 DPY19L2P1Q6NXN4 242 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 DBX2Q6ZNG2 339 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 TMPRSS7Q7RTY8 843 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 PDZD3Q86UT5 571 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 SCUBE3Q8IX30 993 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 C1orf131Q8NDD1 294 aaKnown RBP9.05□□□□□ -0.96
COPB1-210ENST00000533533 BAHD1Q8TBE0 780 aaPredicted RBP9.05□□□□□ -0.96
COPB1-210ENST00000533533 MDM1Q8TC05 714 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 KCTD13Q8WZ19 329 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 FAM149B1Q96BN6 582 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 HSFY1Q96LI6 401 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 NOX5Q96PH1 765 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 ERGIC2Q96RQ1 377 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 NAA15Q9BXJ9 866 aaKnown RBP9.05□□□□□ -0.96
COPB1-210ENST00000533533 CNGB3Q9NQW8 809 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 TM7SF3Q9NS93 570 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 AGO1Q9UL18 857 aaKnown RBP9.05□□□□□ -0.96
COPB1-210ENST00000533533 STRIP2Q9ULQ0 834 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 CLEC4EQ9ULY5 219 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 PCDHGB2Q9Y5G2 931 aa9.05□□□□□ -0.96
COPB1-210ENST00000533533 A0A1B0GTH6 734 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 A0A1B0GVT2 93 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 SLC12A8A0AV02 714 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 YJEFN3A6XGL0 299 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 E5RJQ4 531 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 E7ENQ6 273 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 CAPN9O14815 690 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 FLRT2O43155 660 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 TIMM44O43615 452 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 DKK1O94907 266 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 CYBBP04839 570 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 EPHX1P07099 455 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 ATXN1LP0C7T5 689 aaKnown RBP9.04□□□□□ -0.96
COPB1-210ENST00000533533 CSNK1EP49674 416 aaKnown RBP9.04□□□□□ -0.96
COPB1-210ENST00000533533 DAOAP59103 153 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 PDCLQ13371 301 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 LCE2DQ5TA82 110 aaPredicted RBP9.04□□□□□ -0.96
COPB1-210ENST00000533533 BSPRYQ5W0U4 402 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 TMEM215Q68D42 235 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 OR6B2Q6IFH4 312 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 NOP9Q86U38 636 aaKnown RBP9.04□□□□□ -0.96
COPB1-210ENST00000533533 CACUL1Q86Y37 369 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 DENND1CQ8IV53 801 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 CPXM2Q8N436 756 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 RHBDD1Q8TEB9 315 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 CLEC4CQ8WTT0 213 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 DDI1Q8WTU0 396 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 SORCS1Q8WY21 1168 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 PPP1R13BQ96KQ4 1090 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 CDC6Q99741 560 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 SLC2A11Q9BYW1 496 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 CIPCQ9C0C6 399 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 PCED1AQ9H1Q7 454 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 TOR4AQ9NXH8 423 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 MARCH2Q9P0N8 246 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 IFNKQ9P0W0 207 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 DKK4Q9UBT3 224 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 RAXQ9Y2V3 346 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 DAAM1Q9Y4D1 1078 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 ZNF462Q96JM2 2506 aa9.04□□□□□ -0.96
COPB1-210ENST00000533533 ASH1LQ9NR48 2969 aaKnown RBP9.03□□□□□ -0.96
COPB1-210ENST00000533533 DOCK9Q9BZ29 2069 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 SART1O43290 800 aaKnown RBP9.03□□□□□ -0.96
COPB1-210ENST00000533533 FBXO21O94952 628 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 LTFP02788 710 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 TPM3P06753 285 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 MMEP08473 750 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 HLA-EP13747 358 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 AFF3P51826 1226 aaKnown RBP9.03□□□□□ -0.96
COPB1-210ENST00000533533 JAM2P57087 298 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 SNX16P57768 344 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 CAMK2GQ13555 558 aaPredicted RBP9.03□□□□□ -0.96
COPB1-210ENST00000533533 SUZ12Q15022 739 aaKnown RBP9.03□□□□□ -0.96
COPB1-210ENST00000533533 MEA1Q16626 185 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 KIF19Q2TAC6 998 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 PM20D1Q6GTS8 502 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 SERPINA13PQ6UXR4 307 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 FAM124AQ86V42 546 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 FMNL3Q8IVF7 1028 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 FAM217AQ8IXS0 508 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 TMEM35BQ8NCS4 154 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 OR2T3Q8NH03 318 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 SLC20A1Q8WUM9 679 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 CPLX3Q8WVH0 158 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 HNRNPLLQ8WVV9 542 aaKnown RBP9.03□□□□□ -0.96
COPB1-210ENST00000533533 IRGQQ8WZA9 623 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 SNX19Q92543 992 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 C6orf106Q9H6K1 298 aaPredicted RBP9.03□□□□□ -0.96
COPB1-210ENST00000533533 ABCC13Q9NSE7 274 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 OLA1Q9NTK5 396 aaKnown RBP9.03□□□□□ -0.96
COPB1-210ENST00000533533 TJP2Q9UDY2 1190 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 SFMBT1Q9UHJ3 866 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 CYTH4Q9UIA0 394 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 PCDHGC3Q9UN70 934 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 BTBD3Q9Y2F9 522 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 SLCO1B1Q9Y6L6 691 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 COL6A6A6NMZ7 2263 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 MGAQ8IWI9 3026 aa9.03□□□□□ -0.96
COPB1-210ENST00000533533 MYLKQ15746 1914 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms