RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 SLC9B1Q4ZJI4 515 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 UNC93AQ86WB7 457 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 TMEM126BQ8IUX1 230 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 PSTKQ8IV42 348 aaKnown RBP17.02■□□□□ 0.32
CTSB-228ENST00000533455 PQLC1Q8N2U9 271 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 KIF12Q96FN5 646 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 P2RY11Q96G91 374 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 CNDP1Q96KN2 507 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 ZNF358Q9NW07 568 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 STK39Q9UEW8 545 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 C15orf38-AP3S2A0A0A6YYH1 394 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 KPNA7A9QM74 516 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 G3V2L1 256 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 HSPA4LO95757 839 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 MPOP05164 745 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 ERVK-10P10266 1014 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 SPRP35270 261 aaPredicted RBP17.01■□□□□ 0.31
CTSB-228ENST00000533455 ALDH1A3P47895 512 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 ARPINQ7Z6K5 226 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 CMC1Q7Z7K0 106 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 HIPK4Q8NE63 616 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 STON2Q8WXE9 905 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 NDNQ99608 321 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 FERMT1Q9BQL6 677 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 OXCT2Q9BYC2 517 aaPredicted RBP17.01■□□□□ 0.31
CTSB-228ENST00000533455 PIH1D1Q9NWS0 290 aaKnown RBP17.01■□□□□ 0.31
CTSB-228ENST00000533455 FZD10Q9ULW2 581 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 INPP5FQ9Y2H2 1132 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 ZMPSTE24O75844 475 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 FBXO21O94952 628 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 MLH1P40692 756 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 BST2Q10589 180 aaKnown RBP17.01■□□□□ 0.31
CTSB-228ENST00000533455 USP4Q13107 963 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 GRAMD1BQ3KR37 738 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 NAPRTQ6XQN6 538 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 TMC7Q7Z402 723 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 PLD6Q8N2A8 252 aaKnown RBP17.01■□□□□ 0.31
CTSB-228ENST00000533455 PYROXD2Q8N2H3 581 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 SLC7A14Q8TBB6 771 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 MAPK15Q8TD08 544 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 SREK1Q8WXA9 508 aaKnown RBP17.01■□□□□ 0.31
CTSB-228ENST00000533455 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.01■□□□□ 0.31
CTSB-228ENST00000533455 VPS28Q9UK41 221 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 SNX9Q9Y5X1 595 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 RPS6KL1Q9Y6S9 549 aa17.01■□□□□ 0.31
CTSB-228ENST00000533455 E9PBE3 544 aa17■□□□□ 0.31
CTSB-228ENST00000533455 SLC22A2O15244 555 aa17■□□□□ 0.31
CTSB-228ENST00000533455 KLHL41O60662 606 aa17■□□□□ 0.31
CTSB-228ENST00000533455 THRAP10827 490 aa17■□□□□ 0.31
CTSB-228ENST00000533455 GMPRP36959 345 aa17■□□□□ 0.31
CTSB-228ENST00000533455 GRM5P41594 1212 aa17■□□□□ 0.31
CTSB-228ENST00000533455 HK2P52789 917 aa17■□□□□ 0.31
CTSB-228ENST00000533455 BCAT1P54687 386 aa17■□□□□ 0.31
CTSB-228ENST00000533455 LAMB3Q13751 1172 aa17■□□□□ 0.31
CTSB-228ENST00000533455 PDK1Q15118 436 aa17■□□□□ 0.31
CTSB-228ENST00000533455 C16orf89Q6UX73 402 aa17■□□□□ 0.31
CTSB-228ENST00000533455 ARHGAP22Q7Z5H3 698 aa17■□□□□ 0.31
CTSB-228ENST00000533455 EFCAB3Q8N7B9 438 aa17■□□□□ 0.31
CTSB-228ENST00000533455 COPS5Q92905 334 aa17■□□□□ 0.31
CTSB-228ENST00000533455 PGBD4Q96DM1 585 aa17■□□□□ 0.31
CTSB-228ENST00000533455 DCUN1D1Q96GG9 259 aa17■□□□□ 0.31
CTSB-228ENST00000533455 FCRL3Q96P31 734 aaPredicted RBP17■□□□□ 0.31
CTSB-228ENST00000533455 SERPINI1Q99574 410 aa17■□□□□ 0.31
CTSB-228ENST00000533455 LRRC40Q9H9A6 602 aa17■□□□□ 0.31
CTSB-228ENST00000533455 TCF7L2Q9NQB0 619 aa17■□□□□ 0.31
CTSB-228ENST00000533455 ERAP1Q9NZ08 941 aa17■□□□□ 0.31
CTSB-228ENST00000533455 PIM2Q9P1W9 311 aa17■□□□□ 0.31
CTSB-228ENST00000533455 DERAQ9Y315 318 aa17■□□□□ 0.31
CTSB-228ENST00000533455 A0A1B0GVG6 124 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 NFKBIEO00221 500 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 TSPAN1O60635 241 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 TRIM13O60858 407 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 ZNF189O75820 626 aaPredicted RBP16.99■□□□□ 0.31
CTSB-228ENST00000533455 PIK3R1P27986 724 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 BSPRYQ5W0U4 402 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 ZNF567Q8N184 647 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 TDRD5Q8NAT2 981 aaKnown RBP16.99■□□□□ 0.31
CTSB-228ENST00000533455 ANKRD52Q8NB46 1076 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 LENG8Q96PV6 779 aaPredicted RBP16.99■□□□□ 0.31
CTSB-228ENST00000533455 MID2Q9UJV3 735 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 BRCA1P38398 1863 aaKnown RBP16.99■□□□□ 0.31
CTSB-228ENST00000533455 TXNDC9O14530 226 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 INSRRP14616 1297 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 ACADSBP45954 432 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 IGBP1P78318 339 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 IFRD2Q12894 506 aaPredicted RBP16.99■□□□□ 0.31
CTSB-228ENST00000533455 TLR1Q15399 786 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 ZFP1Q6P2D0 407 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 SATL1Q86VE3 508 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 SPATA24Q86W54 205 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 TNS4Q8IZW8 715 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.99■□□□□ 0.31
CTSB-228ENST00000533455 OR52B2Q96RD2 323 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 EPAS1Q99814 870 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 Q9H521 79 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 MAN1C1Q9NR34 630 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 RAB26Q9ULW5 256 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 PPP2R3BQ9Y5P8 575 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 PAPPA2Q9BXP8 1791 aa16.99■□□□□ 0.31
CTSB-228ENST00000533455 PDCD11Q14690 1871 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms