RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 RAP1GAP2Q684P5 730 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 FAM114A1Q8IWE2 563 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 CFAP52Q8N1V2 620 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 ZCCHC9Q8N567 271 aaKnown RBP11.7□□□□□ -0.54
CLCF1-202ENST00000533438 KDM1BQ8NB78 822 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 BTN2A3PQ96KV6 586 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 PRMT1Q99873 361 aaKnown RBP11.7□□□□□ -0.54
CLCF1-202ENST00000533438 SCNM1Q9BWG6 230 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 ZDHHC5Q9C0B5 715 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 GRPEL1Q9HAV7 217 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.7□□□□□ -0.54
CLCF1-202ENST00000533438 SUN2Q9UH99 717 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 EIF2B4Q9UI10 523 aaKnown RBP11.7□□□□□ -0.54
CLCF1-202ENST00000533438 NEUROG3Q9Y4Z2 214 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 PKD1L2Q7Z442 2459 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 ITIH6Q6UXX5 1313 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 KCNU1A8MYU2 1149 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 BCAT2O15382 392 aaPredicted RBP11.69□□□□□ -0.54
CLCF1-202ENST00000533438 TOP3BO95985 862 aaKnown RBP11.69□□□□□ -0.54
CLCF1-202ENST00000533438 DNTTP04053 509 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 EEF1GP26641 437 aaKnown RBP11.69□□□□□ -0.54
CLCF1-202ENST00000533438 BNC1Q01954 994 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 PTK2Q05397 1052 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 COL9A2Q14055 689 aaPredicted RBP11.69□□□□□ -0.54
CLCF1-202ENST00000533438 HNRNPA1L2Q32P51 320 aaKnown RBP11.69□□□□□ -0.54
CLCF1-202ENST00000533438 TCP11X2Q5H9J9 407 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 EFHC1Q5JVL4 640 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 ZNF776Q68DI1 518 aaPredicted RBP11.69□□□□□ -0.54
CLCF1-202ENST00000533438 SARM1Q6SZW1 724 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 OLFML1Q6UWY5 402 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 MMS22LQ6ZRQ5 1243 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 FAM183BPQ6ZVS7 135 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 FAM124AQ86V42 546 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 CHSY1Q86X52 802 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 PASD1Q8IV76 773 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 LGI2Q8N0V4 545 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 DEFB106AQ8N104 65 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 ATP6V0D2Q8N8Y2 350 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 C1orf131Q8NDD1 294 aaKnown RBP11.69□□□□□ -0.54
CLCF1-202ENST00000533438 PPP1R13BQ96KQ4 1090 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 MIR1-1HGQ9H1L0 117 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 RSPH9Q9H1X1 276 aaPredicted RBP11.69□□□□□ -0.54
CLCF1-202ENST00000533438 NDST4Q9H3R1 872 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 MTG2Q9H4K7 406 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 C6orf106Q9H6K1 298 aaPredicted RBP11.69□□□□□ -0.54
CLCF1-202ENST00000533438 DNAJC12Q9UKB3 198 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 ERVW-1Q9UQF0 538 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.69□□□□□ -0.54
CLCF1-202ENST00000533438 MSRB2Q9Y3D2 182 aa11.69□□□□□ -0.54
CLCF1-202ENST00000533438 IGF2RP11717 2491 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 SPAARA0A1B0GVQ0 90 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 LRRC10BA6NIK2 292 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 H0Y626 953 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 FOXN3O00409 490 aaPredicted RBP11.68□□□□□ -0.54
CLCF1-202ENST00000533438 HSF2BPO75031 334 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 SIN3BO75182 1162 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 SEMA4FO95754 770 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 ERBB2P04626 1255 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 SRPRAP08240 638 aaKnown RBP11.68□□□□□ -0.54
CLCF1-202ENST00000533438 PNMA6AP0CW24 399 aaPredicted RBP11.68□□□□□ -0.54
CLCF1-202ENST00000533438 ATP1A3P13637 1013 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
CLCF1-202ENST00000533438 SPINK2P20155 84 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 CDK11BP21127 795 aaKnown RBP11.68□□□□□ -0.54
CLCF1-202ENST00000533438 CTSOP43234 321 aaPredicted RBP11.68□□□□□ -0.54
CLCF1-202ENST00000533438 ST8SIA6P61647 398 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 FAM193AP78312 1265 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 KCNMA1Q12791 1236 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 SLC12A1Q13621 1099 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 HNRNPDQ14103 355 aaKnown RBP11.68□□□□□ -0.54
CLCF1-202ENST00000533438 KCNJ12Q14500 433 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 PTPN20Q4JDL3 420 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 VWA3BQ502W6 1294 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 C9orf64Q5T6V5 341 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 USP30Q70CQ3 517 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 SLC26A9Q7LBE3 791 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 SLC47A2Q86VL8 602 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 CCDC117Q8IWD4 279 aaPredicted RBP11.68□□□□□ -0.54
CLCF1-202ENST00000533438 APCDD1Q8J025 514 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 ZNF397Q8NF99 534 aaPredicted RBP11.68□□□□□ -0.54
CLCF1-202ENST00000533438 TUBGCP2Q9BSJ2 902 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 BTBD1Q9H0C5 482 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 OSGEPQ9NPF4 335 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 DDIT4Q9NX09 232 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 KIAA1522Q9P206 1035 aaPredicted RBP11.68□□□□□ -0.54
CLCF1-202ENST00000533438 LIMA1Q9UHB6 759 aaKnown RBP11.68□□□□□ -0.54
CLCF1-202ENST00000533438 SCML1Q9UN30 329 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 SLCO1B1Q9Y6L6 691 aa11.68□□□□□ -0.54
CLCF1-202ENST00000533438 TARSL2A2RTX5 802 aaKnown RBP11.67□□□□□ -0.54
CLCF1-202ENST00000533438 TTC34A8MYJ7 566 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 F5H5T6 163 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 SH3BP5O60239 455 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 DAB1O75553 588 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 GRAP2O75791 330 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 MOCS3O95396 460 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 ZNF883P0CG24 379 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 SLC2A3P11169 496 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 ABCB4P21439 1286 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 CCR1P32246 355 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 CDH5P33151 784 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms