RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 TSPAN8P19075 237 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 FECHP22830 423 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 MRPS15P82914 257 aaKnown RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 MTFR1Q15390 333 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 MAPRE2Q15555 327 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 AGKQ53H12 422 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 FOXR2Q6PJQ5 311 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 LBX2Q6XYB7 198 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 C12orf56Q8IXR9 622 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 C1orf127Q8N9H9 656 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 CACYBPQ9HB71 228 aaKnown RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 SELENONQ9NZV5 590 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 NOCTQ9UK39 431 aaKnown RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 AAR2Q9Y312 384 aaKnown RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 H0Y626 953 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 PSMD3O43242 534 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 HOXD12P35452 270 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 LHX1P48742 406 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 PEX5P50542 639 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 ATP1A4Q13733 1029 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 GALNTL6Q49A17 601 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 MARC1Q5VT66 337 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 KCNMB4Q86W47 210 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 DIS3LQ8TF46 1054 aaKnown RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 INPP5DQ92835 1189 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 ERLEC1Q96DZ1 483 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 OXNAD1Q96HP4 312 aaPredicted RBP12.49□□□□□ -0.41
BDNF-218ENST00000533246 CNBD2Q96M20 576 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 OMDQ99983 421 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 TBC1D10AQ9BXI6 508 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 TRIM54Q9BYV2 358 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 TRIM15Q9C019 465 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 LNPEPQ9UIQ6 1025 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 SNX13Q9Y5W8 968 aa12.49□□□□□ -0.41
BDNF-218ENST00000533246 MGRN1O60291 552 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 ASMTLO95671 621 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 CKMP06732 381 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 PSEN2P49810 448 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 GEMP55040 296 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 MAPRE1Q15691 268 aaKnown RBP12.48□□□□□ -0.41
BDNF-218ENST00000533246 AGAP9Q5VTM2 703 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 PRR23CQ6ZRP0 262 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 CMC1Q7Z7K0 106 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 TMEM192Q8IY95 271 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 CLEC4FQ8N1N0 589 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 TDRD5Q8NAT2 981 aaKnown RBP12.48□□□□□ -0.41
BDNF-218ENST00000533246 GPR152Q8TDT2 470 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 RRAGCQ9HB90 399 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 VTA1Q9NP79 307 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 COMMD3-BMI1R4GMX3 469 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 SRP72O76094 671 aaKnown RBP12.48□□□□□ -0.41
BDNF-218ENST00000533246 ERCC2P18074 760 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 POU4F1Q01851 419 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 FSCN1Q16658 493 aaKnown RBP12.48□□□□□ -0.41
BDNF-218ENST00000533246 SH3PXD2AQ5TCZ1 1133 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 ANKRD22Q5VYY1 191 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 IZUMO2Q6UXV1 221 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 RNF180Q86T96 592 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 SH3TC2Q8TF17 1288 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 GTF3C2Q8WUA4 911 aaPredicted RBP12.48□□□□□ -0.41
BDNF-218ENST00000533246 SKA1Q96BD8 255 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 GPR20Q99678 358 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 TCF7L2Q9NQB0 619 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 DDX28Q9NUL7 540 aaKnown RBP12.48□□□□□ -0.41
BDNF-218ENST00000533246 TUBGCP4Q9UGJ1 667 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 ZNF214Q9UL59 606 aaPredicted RBP12.48□□□□□ -0.41
BDNF-218ENST00000533246 PPP2R3BQ9Y5P8 575 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 ADGRA3Q8IWK6 1321 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 DPYSL4O14531 572 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 SHOX2O60902 331 aaPredicted RBP12.48□□□□□ -0.41
BDNF-218ENST00000533246 TCF4P15884 667 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 ATP6V1C1P21283 382 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 MMP13P45452 471 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 PKNOX1P55347 436 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 FSTL1Q12841 308 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 FAM171A1Q5VUB5 890 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 PDPK2PQ6A1A2 396 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 PCYOX1LQ8NBM8 494 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 PLEKHO2Q8TD55 490 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 ZNF516Q92618 1163 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 SH3KBP1Q96B97 665 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 CNDP1Q96KN2 507 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 MARK4Q96L34 752 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 LPIN3Q9BQK8 851 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 HAUS8Q9BT25 410 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 ELOVL4Q9GZR5 314 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 DHX33Q9H6R0 707 aaKnown RBP12.48□□□□□ -0.41
BDNF-218ENST00000533246 HPS4Q9NQG7 708 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 STX18Q9P2W9 335 aaKnown RBP12.48□□□□□ -0.41
BDNF-218ENST00000533246 SNED1Q8TER0 1413 aa12.48□□□□□ -0.41
BDNF-218ENST00000533246 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 TRIM13O60858 407 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 CCDC159P0C7I6 412 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 SLC25A3Q00325 362 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 PLOD1Q02809 727 aaPredicted RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 ZNF177Q13360 481 aaPredicted RBP12.47□□□□□ -0.41
BDNF-218ENST00000533246 CDH18Q13634 790 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 SLC1A5Q15758 541 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 SLC45A4Q5BKX6 768 aa12.47□□□□□ -0.41
BDNF-218ENST00000533246 TXNRD3NBQ6F5E7 133 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms