RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 HEATR9A2RTY3 570 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 TRIM38O00635 465 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 RNASEH1O60930 286 aaKnown RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 ZMPSTE24O75844 475 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 PIGNO95427 931 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 PENKP01210 267 aaPredicted RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 ERVK-10P10266 1014 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 ITGAXP20702 1163 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 MLH1P40692 756 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 PTPN9P43378 593 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 CLCN3P51790 818 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 MRPS5P82675 430 aaKnown RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 LSAMPQ13449 338 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 DPYSQ14117 519 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 PDE1CQ14123 709 aaPredicted RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 DCAF4L1Q3SXM0 396 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 SFT2D3Q587I9 215 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 LPCAT2Q7L5N7 544 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 CATSPER4Q7RTX7 472 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 PGAM4Q8N0Y7 254 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 DCLK2Q8N568 766 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 PPHLN1Q8NEY8 458 aaKnown RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 THAP11Q96EK4 314 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 RMND5BQ96G75 393 aaPredicted RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 ZNF395Q9H8N7 513 aaPredicted RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 USP29Q9HBJ7 922 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 DDX18Q9NVP1 670 aaKnown RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 ACOT9Q9Y305 439 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 ADGRA2Q96PE1 1338 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 SF3B1O75533 1304 aaKnown RBP eCLIP9.61□□□□□ -0.87
BDNF-216ENST00000532997 CABYRO75952 493 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 TCN1P20061 433 aaPredicted RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 WNT7BP56706 349 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 CNTNAP1P78357 1384 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 SLC12A1Q13621 1099 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 ADGRE1Q14246 886 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 KIF19Q2TAC6 998 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 TMC7Q7Z402 723 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 SATL1Q86VE3 508 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 KCNMB4Q86W47 210 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 UNC93AQ86WB7 457 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 SCUBE3Q8IX30 993 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 TNIP2Q8NFZ5 429 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 ZC3H15Q8WU90 426 aaKnown RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 TSPAN17Q96FV3 270 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 RHBDL2Q9NX52 303 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 TJP2Q9UDY2 1190 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 AP4S1Q9Y587 144 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 XPO1O14980 1071 aaKnown RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 MAP3K13O43283 966 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 AKAP10O43572 662 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 MAGEA6P43360 314 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 NRLP54845 237 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 CCNA1P78396 465 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 NME3Q13232 169 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 TTLL12Q14166 644 aaPredicted RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 DCAF6Q58WW2 860 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 LIPMQ5VYY2 423 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 EEF1DP3Q658K8 133 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 FAM131BQ86XD5 332 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 PSTKQ8IV42 348 aaKnown RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 KBTBD2Q8IY47 623 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 C1orf127Q8N9H9 656 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 USP13Q92995 863 aaPredicted RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 HDAC11Q96DB2 347 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 OSBPL11Q9BXB4 747 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 IARS2Q9NSE4 1012 aaKnown RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 TRHDEQ9UKU6 1024 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 PLA2G4CQ9UP65 541 aa9.61□□□□□ -0.87
BDNF-216ENST00000532997 RUVBL2Q9Y230 463 aaKnown RBP9.61□□□□□ -0.87
BDNF-216ENST00000532997 H3BNX3 289 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 ITM2AO43736 263 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 METTL18O95568 372 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 CD4P01730 458 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 FGF3P11487 239 aaPredicted RBP9.6□□□□□ -0.87
BDNF-216ENST00000532997 PSMB4P28070 264 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 ATXN3P54252 364 aaPredicted RBP9.6□□□□□ -0.87
BDNF-216ENST00000532997 GBE1Q04446 702 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 DLG1Q12959 904 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 USP4Q13107 963 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 CCDC142Q17RM4 750 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 DSELQ8IZU8 1212 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 TSPAN14Q8NG11 270 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 SDCCAG3Q96C92 435 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 ACE2Q9BYF1 805 aaPredicted RBP9.6□□□□□ -0.87
BDNF-216ENST00000532997 TMEM216Q9P0N5 145 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 SQORQ9Y6N5 450 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 PDLIM1O00151 329 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 FARP2O94887 1054 aaPredicted RBP9.6□□□□□ -0.87
BDNF-216ENST00000532997 TXNP10599 105 aaKnown RBP9.6□□□□□ -0.87
BDNF-216ENST00000532997 MTTPP55157 894 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 PKNOX1P55347 436 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 CRADDP78560 199 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 POU5F1BQ06416 359 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 TMEM132BQ14DG7 1078 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 HERC3Q15034 1050 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 TRIM67Q6ZTA4 783 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 STRADAQ7RTN6 431 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 PLPPR4Q7Z2D5 763 aa9.6□□□□□ -0.87
BDNF-216ENST00000532997 ZNF354CQ86Y25 554 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms