RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ACTN2P35609 894 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 HSPA9P38646 679 aaKnown RBP8.15□□□□□ -1.1
SSBP3-211ENST00000528787 GRIA2P42262 883 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 TNFRSF4P43489 277 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 CLCN6P51797 869 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 PLK1P53350 603 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 PITX1P78337 314 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-211ENST00000528787 CKAP4Q07065 602 aaKnown RBP8.15□□□□□ -1.1
SSBP3-211ENST00000528787 SFSWAPQ12872 951 aaKnown RBP8.15□□□□□ -1.1
SSBP3-211ENST00000528787 SEMA3BQ13214 749 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 XRCC4Q13426 336 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 GRM2Q14416 872 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 RFTN1Q14699 578 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-211ENST00000528787 POLD3Q15054 466 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-211ENST00000528787 PDK1Q15118 436 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 SMTNL2Q2TAL5 461 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 ANKRD20A8PQ5CZ79 823 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 KCNT1Q5JUK3 1230 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 LY6G5CQ5SRR4 150 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 SH3PXD2AQ5TCZ1 1133 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 MANEALQ5VSG8 457 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 SPOCD1Q6ZMY3 1216 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 TPGS1Q6ZTW0 290 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 ZNF354CQ86Y25 554 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 DNAAF5Q86Y56 855 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 RFX6Q8HWS3 928 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 RNF135Q8IUD6 432 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 UMODL1-AS1Q8N2C9 162 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 CARNMT1Q8N4J0 409 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 ADAMTS19Q8TE59 1207 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 CD101Q93033 1021 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 CSPG4P5Q96PW8 444 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 RNF157Q96PX1 679 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 UHRF1Q96T88 793 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-211ENST00000528787 VAT1Q99536 393 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 P2RY13Q9BPV8 354 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 OSBPL8Q9BZF1 889 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 MUC3BQ9H195 1237 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 FBRSQ9HAH7 460 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 PCDH18Q9HCL0 1135 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 DNAJC17Q9NVM6 304 aaKnown RBP8.15□□□□□ -1.1
SSBP3-211ENST00000528787 AMACRQ9UHK6 382 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 SLC25A13Q9UJS0 675 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 PYCARDQ9ULZ3 195 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 FARP1Q9Y4F1 1045 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-211ENST00000528787 SAR1BQ9Y6B6 198 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 PIAS3Q9Y6X2 628 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 TICRRQ7Z2Z1 1910 aa8.15□□□□□ -1.11
SSBP3-211ENST00000528787 SZT2Q5T011 3432 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 FAM170AA1A519 330 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 CFAP69A5D8W1 941 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 TBC1D3BA6NDS4 549 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 HACD1B0YJ81 288 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 SPECC1L-ADORA2AF8WAN1 911 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 APOC4-APOC2K7ER74 178 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 GFRA2O00451 464 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 TRDMT1O14717 391 aaKnown RBP8.14□□□□□ -1.11
SSBP3-211ENST00000528787 DCXO43602 365 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 FTCDO95954 541 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 APOC2P02655 101 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 SRPRAP08240 638 aaKnown RBP8.14□□□□□ -1.11
SSBP3-211ENST00000528787 HOXD9P28356 352 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-211ENST00000528787 CTHP32929 405 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 GJA4P35212 333 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 DEKP35659 375 aaKnown RBP8.14□□□□□ -1.11
SSBP3-211ENST00000528787 CDKN2BP42772 138 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 TNNT3P45378 269 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-211ENST00000528787 PEX5P50542 639 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 VASPP50552 380 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-211ENST00000528787 RENBPP51606 427 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 TUBB4BP68371 445 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 GNA12Q03113 381 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 RAD51Q06609 339 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 SIGLEC14Q08ET2 396 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 CCDC15Q0P6D6 951 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 DPYSQ14117 519 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 DPYSL3Q14195 570 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 GRM3Q14832 879 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 PAFAH1B3Q15102 231 aaKnown RBP8.14□□□□□ -1.11
SSBP3-211ENST00000528787 MLF2Q15773 248 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-211ENST00000528787 SLC44A4Q53GD3 710 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 FYB2Q5VWT5 728 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 RNF43Q68DV7 783 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 NADSYN1Q6IA69 706 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 RHBDF2Q6PJF5 856 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 C4orf22Q6V702 233 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 TMEM25Q86YD3 366 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 SLC35F6Q8N357 371 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 ATPAF2Q8N5M1 289 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 ARFGAP1Q8N6T3 406 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.14□□□□□ -1.11
SSBP3-211ENST00000528787 DCAF4L2Q8NA75 395 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 MNS1Q8NEH6 495 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 FAM3CQ92520 227 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 TSC1Q92574 1164 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 FATE1Q969F0 183 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 FAF2Q96CS3 445 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 ZNF599Q96NL3 588 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 PEBP4Q96S96 227 aa8.14□□□□□ -1.11
SSBP3-211ENST00000528787 TRIM7Q9C029 511 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms