RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 EEA1Q15075 1411 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 SLC22A23A1A5C7 686 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 WDR91A4D1P6 747 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 RNASEH2AO75792 299 aaKnown RBP6.48□□□□□ -1.37
PCF11-202ENST00000528336 BCAR3O75815 825 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 KRT38O76015 456 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 PTMAP06454 111 aaKnown RBP6.48□□□□□ -1.37
PCF11-202ENST00000528336 RFPL3SP0C7P2 107 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 VEGFAP15692 232 aaPredicted RBP6.48□□□□□ -1.37
PCF11-202ENST00000528336 HOXA7P31268 230 aaPredicted RBP6.48□□□□□ -1.37
PCF11-202ENST00000528336 HALP42357 657 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 GRK6P43250 576 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 ZNF91Q05481 1191 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 DMWDQ09019 674 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 GALNTL6Q49A17 601 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 ANO7Q6IWH7 933 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 CPXCR1Q8N123 301 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.48□□□□□ -1.37
PCF11-202ENST00000528336 CSGALNACT1Q8TDX6 532 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 FAM167BQ9BTA0 163 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 TMEM120AQ9BXJ8 343 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 MYLK2Q9H1R3 596 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 RSPH9Q9H1X1 276 aaPredicted RBP6.48□□□□□ -1.37
PCF11-202ENST00000528336 PI4KBQ9UBF8 816 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 SRP68Q9UHB9 627 aaKnown RBP6.48□□□□□ -1.37
PCF11-202ENST00000528336 KCND3Q9UK17 655 aa6.48□□□□□ -1.37
PCF11-202ENST00000528336 GRIN2AQ12879 1464 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 CARMIL1Q5VZK9 1371 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 CUL7Q14999 1698 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.47□□□□□ -1.37
PCF11-202ENST00000528336 DNAJC9-AS1A6NH13 148 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 H0Y3Z8 333 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 CD63P08962 238 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 AKR1A1P14550 325 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 SERPINA4P29622 427 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 CPA2P48052 419 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 PRKAA2P54646 552 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 SLC9C1Q4G0N8 1177 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 TTC22Q5TAA0 569 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 SYNE3Q6ZMZ3 975 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 GALNT15Q8N3T1 639 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 PRSS3P2Q8NHM4 247 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 P2RY11Q96G91 374 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 HERPUD2Q9BSE4 406 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 OSBPL5Q9H0X9 879 aaPredicted RBP6.47□□□□□ -1.37
PCF11-202ENST00000528336 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.47□□□□□ -1.37
PCF11-202ENST00000528336 NDUFAF4Q9P032 175 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 PGAP2Q9UHJ9 254 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 COPG1Q9Y678 874 aaKnown RBP6.47□□□□□ -1.37
PCF11-202ENST00000528336 EMSYQ7Z589 1322 aa6.47□□□□□ -1.37
PCF11-202ENST00000528336 C3orf70A6NLC5 250 aaPredicted RBP6.46□□□□□ -1.38
PCF11-202ENST00000528336 C2CD4BA6NLJ0 364 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 ADAM10O14672 748 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 PIP5K1CO60331 668 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 CNTN5O94779 1100 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 ALDOCP09972 364 aaKnown RBP6.46□□□□□ -1.38
PCF11-202ENST00000528336 RPS6KB1P23443 525 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 SOX2P48431 317 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 RCAN1P53805 252 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 HSF1Q00613 529 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 TAF5Q15542 800 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 TBRG1Q3YBR2 411 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 EARS2Q5JPH6 523 aaKnown RBP6.46□□□□□ -1.38
PCF11-202ENST00000528336 ZKSCAN2Q63HK3 967 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 SYT13Q7L8C5 426 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 KRT77Q7Z794 578 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 CCDC89Q8N998 374 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 SPATA5Q8NB90 893 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 GOLGA1Q92805 767 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 KAT2BQ92831 832 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 CUL5Q93034 780 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 TBC1D20Q96BZ9 403 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 SIGLEC11Q96RL6 698 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 DDX23Q9BUQ8 820 aaKnown RBP6.46□□□□□ -1.38
PCF11-202ENST00000528336 SLC29A3Q9BZD2 475 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 SFXN1Q9H9B4 322 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 TMEM184CQ9NVA4 438 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 POLG2Q9UHN1 485 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 BAG5Q9UL15 447 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 SPATA31A5Q5VU36 1347 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 SPATA31A7Q8IWB4 1347 aa6.46□□□□□ -1.38
PCF11-202ENST00000528336 CHD1O14646 1710 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 NUP160Q12769 1436 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 CYP3A7-CYP3A51PA0A087WV96 503 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 MBD3L5A6NJ08 208 aaPredicted RBP6.45□□□□□ -1.38
PCF11-202ENST00000528336 E7EVH7 732 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 TCERG1O14776 1098 aaKnown RBP6.45□□□□□ -1.38
PCF11-202ENST00000528336 USP12O75317 370 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 HEXIM1O94992 359 aaKnown RBP6.45□□□□□ -1.38
PCF11-202ENST00000528336 CYP19A1P11511 503 aaPredicted RBP6.45□□□□□ -1.38
PCF11-202ENST00000528336 CYP3A7P24462 503 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 CST5P28325 142 aaPredicted RBP6.45□□□□□ -1.38
PCF11-202ENST00000528336 HOXD9P28356 352 aaPredicted RBP6.45□□□□□ -1.38
PCF11-202ENST00000528336 MMP13P45452 471 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 CFHR1Q03591 330 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 PDCLQ13371 301 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 CUL4BQ13620 913 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 Q4G0T1 1027 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 HYIQ5T013 277 aa6.45□□□□□ -1.38
PCF11-202ENST00000528336 LIPMQ5VYY2 423 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms