RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 MAP3K7CLP57077 242 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 DAOAP59103 153 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 TPI1P60174 286 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 RPL10AP62906 217 aaKnown RBP11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 IRX4P78413 519 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 PPIDQ08752 370 aaKnown RBP11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 MUM1Q2TAK8 710 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 TRMT5Q32P41 509 aaKnown RBP11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 TMEM135Q86UB9 458 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 SCUBE1Q8IWY4 988 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 RBM15BQ8NDT2 890 aaKnown RBP11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 VAT1Q99536 393 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 KATNAL1Q9BW62 490 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 CEP41Q9BYV8 373 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 WDR6Q9NNW5 1121 aaKnown RBP11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 CASS4Q9NQ75 786 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 KRT82Q9NSB4 513 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 COPG2Q9UBF2 871 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 ZNF212Q9UDV6 495 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 FBXW11Q9UKB1 542 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 VANGL2Q9ULK5 521 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 PLA2G4CQ9UP65 541 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 APOBEC2Q9Y235 224 aaKnown RBP11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 C17orf102A2RUQ5 167 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 AP3B1O00203 1094 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 NVLO15381 856 aaKnown RBP11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 CIB2O75838 187 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 ERVK-10P10266 1014 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 ALOX15P16050 662 aaPredicted RBP11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 MLH1P40692 756 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 CPA2P48052 419 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 SERPINB8P50452 374 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 KDSRQ06136 332 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 TUBB3Q13509 450 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 RCN2Q14257 317 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 RAB41Q5JT25 222 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 SNX30Q5VWJ9 437 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 ITPRIPL1Q6GPH6 555 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 TWF2Q6IBS0 349 aaKnown RBP11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 HFE2Q6ZVN8 426 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 OR52K1Q8NGK4 314 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 WDR60Q8WVS4 1066 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 HDAC11Q96DB2 347 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 RBBP8Q99708 897 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 ULBP1Q9BZM6 244 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 SPON1Q9HCB6 807 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 PIH1D1Q9NWS0 290 aaKnown RBP11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 DNAJC28Q9NX36 388 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 DDX43Q9NXZ2 648 aaKnown RBP11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 PTCH2Q9Y6C5 1203 aa11.06□□□□□ -0.64
PTPMT1-204ENST00000527079 IQCA1LA6NCM1 817 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 PRR5-ARHGAP8B1AHC4 643 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 KCNK1O00180 336 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 NRP1O14786 923 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 ITM2AO43736 263 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 AP1G2O75843 785 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 KRT36O76013 467 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 PRKCGP05129 697 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 MPOP05164 745 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 KCNA4P22459 653 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 SERPINB6P35237 376 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 NPY2RP49146 381 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 HARS2P49590 506 aaKnown RBP11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 LIMK2P53671 638 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 ARHGAP8P85298 464 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 PRAMEF19Q5SWL8 479 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 OLFML2BQ68BL8 750 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 KCTD11Q693B1 232 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 FAM35AQ86V20 835 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 C10orf107Q8IVU9 208 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 PPP1R13LQ8WUF5 828 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 ZNF669Q96BR6 464 aaPredicted RBP11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 ZNF333Q96JL9 665 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 SENP8Q96LD8 212 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 ZNF778Q96MU6 729 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 FAM161BQ96MY7 647 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 EBF4Q9BQW3 602 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 GBA3Q9H227 469 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 TSPYL2Q9H2G4 693 aaPredicted RBP11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 ZNF408Q9H9D4 720 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 CRTAC1Q9NQ79 661 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 SNX15Q9NRS6 342 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 CORO1CQ9ULV4 474 aaPredicted RBP11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 SOX13Q9UN79 622 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 Q9Y3F1 56 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 YJEFN3A6XGL0 299 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 FAM72CH0Y354 149 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 LYPLA1O75608 230 aaPredicted RBP11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 SMNDC1O75940 238 aaKnown RBP eCLIP11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 ZNF865P0CJ78 1059 aaPredicted RBP11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 RALBP11234 206 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 CPA3P15088 417 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 CYP2B6P20813 491 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 DNAJB2P25686 324 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 HOXC8P31273 242 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 ABCE1P61221 599 aaKnown RBP11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 FKBP1BP68106 108 aa11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 THOC5Q13769 683 aaKnown RBP11.05□□□□□ -0.64
PTPMT1-204ENST00000527079 RABGAP1LQ5R372 815 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms