RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 NUDT5Q9UKK9 219 aa17.88■□□□□ 0.45
CCS-204ENST00000526066 ZMIZ1Q9ULJ6 1067 aa17.88■□□□□ 0.45
CCS-204ENST00000526066 GUCA1BQ9UMX6 200 aa17.88■□□□□ 0.45
CCS-204ENST00000526066 SLC9A3R1O14745 358 aaPredicted RBP17.87■□□□□ 0.45
CCS-204ENST00000526066 BUB1O43683 1085 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 BUB1BO60566 1050 aaPredicted RBP17.87■□□□□ 0.45
CCS-204ENST00000526066 TCF3P15923 654 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 DEKP35659 375 aaKnown RBP17.87■□□□□ 0.45
CCS-204ENST00000526066 DPP6P42658 865 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 COG7P83436 770 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 ATP11AP98196 1134 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 RING1Q06587 406 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 BYSLQ13895 437 aaKnown RBP17.87■□□□□ 0.45
CCS-204ENST00000526066 TRIP4Q15650 581 aaPredicted RBP17.87■□□□□ 0.45
CCS-204ENST00000526066 C15orf59Q2T9L4 293 aaPredicted RBP17.87■□□□□ 0.45
CCS-204ENST00000526066 CCDC33Q8N5R6 958 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 FAM172AQ8WUF8 416 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 EZH1Q92800 747 aaPredicted RBP17.87■□□□□ 0.45
CCS-204ENST00000526066 BTBD6Q96KE9 485 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 KLF16Q9BXK1 252 aaPredicted RBP17.87■□□□□ 0.45
CCS-204ENST00000526066 FAM204AQ9H8W3 233 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 POLMQ9NP87 494 aaPredicted RBP17.87■□□□□ 0.45
CCS-204ENST00000526066 DDIT4Q9NX09 232 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 TRMT1Q9NXH9 659 aaKnown RBP17.87■□□□□ 0.45
CCS-204ENST00000526066 SFMBT1Q9UHJ3 866 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 RASAL2Q9UJF2 1139 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 MMP17Q9ULZ9 603 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 TLR6Q9Y2C9 796 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 ANAPC1Q9H1A4 1944 aa17.87■□□□□ 0.45
CCS-204ENST00000526066 MDM4O15151 490 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 RNF8O76064 485 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 IGLV3-27P01718 113 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 MBL2P11226 248 aaPredicted RBP17.86■□□□□ 0.45
CCS-204ENST00000526066 TFE3P19532 575 aaPredicted RBP17.86■□□□□ 0.45
CCS-204ENST00000526066 RDXP35241 583 aaKnown RBP17.86■□□□□ 0.45
CCS-204ENST00000526066 PCK1P35558 622 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 SLC1A1P43005 524 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 CXCR3P49682 368 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 NAP1L1P55209 391 aaKnown RBP17.86■□□□□ 0.45
CCS-204ENST00000526066 HDAC4P56524 1084 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 MRPS21P82921 87 aaKnown RBP17.86■□□□□ 0.45
CCS-204ENST00000526066 DEUP1Q05D60 604 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 MESDQ14696 234 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 RASSF3Q86WH2 238 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 MIB1Q86YT6 1006 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 ADAM32Q8TC27 787 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 UBE2Q2Q8WVN8 375 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 SLC39A13Q96H72 371 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 LINC00597Q9H2U6 94 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.86■□□□□ 0.45
CCS-204ENST00000526066 RALYQ9UKM9 306 aaKnown RBP17.86■□□□□ 0.45
CCS-204ENST00000526066 PAXBP1Q9Y5B6 917 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 ABCA7Q8IZY2 2146 aa17.86■□□□□ 0.45
CCS-204ENST00000526066 SLC12A8A0AV02 714 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 USP27XA6NNY8 438 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 LRCH4O75427 683 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 MOCS3O95396 460 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 SLC2A3P11169 496 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 TBX4P57082 545 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 MTA1Q13330 715 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 CRY1Q16526 586 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 CDO1Q16878 200 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 HSF5Q4G112 596 aaPredicted RBP17.85■□□□□ 0.45
CCS-204ENST00000526066 TRIM61Q5EBN2 209 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 SND1Q7KZF4 910 aaKnown RBP eCLIP17.85■□□□□ 0.45
CCS-204ENST00000526066 SLFN11Q7Z7L1 901 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 DDX42Q86XP3 938 aaKnown RBP eCLIP17.85■□□□□ 0.45
CCS-204ENST00000526066 SYCE1Q8N0S2 351 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 PGBD3Q8N328 593 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 ARFGAP1Q8N6T3 406 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 LRRC57Q8N9N7 239 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 MDGA1Q8NFP4 955 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 PLD4Q96BZ4 506 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 ZFRQ96KR1 1074 aaKnown RBP17.85■□□□□ 0.45
CCS-204ENST00000526066 PIGVQ9NUD9 493 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 CALCOCO1Q9P1Z2 691 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 CPQQ9Y646 472 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 CAPN6Q9Y6Q1 641 aa17.85■□□□□ 0.45
CCS-204ENST00000526066 GRID2IPA4D2P6 1211 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 TMEM110-MUSTN1A8MSY1 372 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.84■□□□□ 0.45
CCS-204ENST00000526066 PATE3B3GLJ2 98 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 K7EQS6 105 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 LEFTY2O00292 366 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 MSI1O43347 362 aaKnown RBP17.84■□□□□ 0.45
CCS-204ENST00000526066 ADH1CP00326 375 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 APODP05090 189 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 BCKDHBP21953 392 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 OPRD1P41143 372 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 ATXN3P54252 364 aaPredicted RBP17.84■□□□□ 0.45
CCS-204ENST00000526066 IRX4P78413 519 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 NME3Q13232 169 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 COL9A2Q14055 689 aaPredicted RBP17.84■□□□□ 0.45
CCS-204ENST00000526066 EOGTQ5NDL2 527 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 BRMS1LQ5PSV4 323 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 KIAA1958Q8N8K9 716 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 KDF1Q8NAX2 398 aaPredicted RBP17.84■□□□□ 0.45
CCS-204ENST00000526066 TRIM58Q8NG06 486 aa17.84■□□□□ 0.45
CCS-204ENST00000526066 FCRL2Q96LA5 508 aaPredicted RBP17.84■□□□□ 0.45
CCS-204ENST00000526066 PNKPQ96T60 521 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms