RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 NDUFS2O75306 463 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 MOCS3O95396 460 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 F9P00740 461 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 SERPINC1P01008 464 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 ITPKAP23677 461 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 MZF1P28698 734 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 NSFP46459 744 aaKnown RBP13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 ST8SIA6P61647 398 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 PTP4A2Q12974 167 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 CAMK2GQ13555 558 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 CDO1Q16878 200 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 C15orf59Q2T9L4 293 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 PLEKHG6Q3KR16 790 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 BRMS1LQ5PSV4 323 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 SH3PXD2AQ5TCZ1 1133 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 LYSMD4Q5XG99 296 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 DGLUCYQ7Z3D6 616 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 FAM124AQ86V42 546 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 SLC41A1Q8IVJ1 513 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 OR52K2Q8NGK3 314 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 OR2T3Q8NH03 318 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 RXFP2Q8WXD0 754 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 TOE1Q96GM8 510 aaKnown RBP13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 MYO19Q96H55 970 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 RPL10LQ96L21 214 aaKnown RBP13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 MRGPRX3Q96LB0 322 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 ADAM22Q9P0K1 906 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 SLCO3A1Q9UIG8 710 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 CKAP5Q14008 2032 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 TNRC6BQ9UPQ9 1833 aaKnown RBP13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 SPTBN4Q9H254 2564 aa13.25□□□□□ -0.29
TRAPPC4-205ENST00000525079 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 A0A1B0GTH6 734 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 A0A1B0GVM2 712 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 TCAF2A6NFQ2 919 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 TTC34A8MYJ7 566 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 KHNYNO15037 678 aaKnown RBP13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 CNTN5O94779 1100 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 ASLP04424 464 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 ACADMP11310 421 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 FERP16591 822 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 CD6P30203 668 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 RDXP35241 583 aaKnown RBP13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 STK19P49842 368 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 TPMTP51580 245 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 IRX4P78413 519 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 ECT2LQ008S8 904 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 ZNF33AQ06730 810 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 ZNF177Q13360 481 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 CCDC14Q49A88 953 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 ALFQ53S48 1182 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 TTC39BQ5VTQ0 682 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 CXorf57Q6NSI4 855 aaKnown RBP13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 IRF2BP2Q7Z5L9 587 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 METTL3Q86U44 580 aaKnown RBP13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 FAM131BQ86XD5 332 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 NETO1Q8TDF5 533 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 BAP1Q92560 729 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 PGAP3Q96FM1 320 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 HSPA12BQ96MM6 686 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 GPR174Q9BXC1 333 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 WSB2Q9NYS7 404 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 USP36Q9P275 1121 aaKnown RBP13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 SUN2Q9UH99 717 aa13.24□□□□□ -0.29
TRAPPC4-205ENST00000525079 LRRC53A6NM62 1247 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 FOXD2O60548 495 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 SRGAP2O75044 1071 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 SIN3BO75182 1162 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 TNFAIP3P21580 790 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 SDHBP21912 280 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 MAOBP27338 520 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 RPS14P62263 151 aaKnown RBP13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 FANCCQ00597 558 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 MTA1Q13330 715 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 NR1I3Q14994 352 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 ASIC2Q16515 512 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 ZSCAN23Q3MJ62 389 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 TRIM61Q5EBN2 209 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 SPDYCQ5MJ68 293 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 STPG1Q5TH74 334 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 RNF219Q5W0B1 726 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 BNIPLQ7Z465 357 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 PHF13Q86YI8 300 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 SYT12Q8IV01 421 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 ZNF683Q8IZ20 524 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 RGL4Q8IZJ4 473 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 RTKNQ9BST9 563 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 SELENOOQ9BVL4 669 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 FSCN3Q9NQT6 498 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 MPP6Q9NZW5 540 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 PILRBQ9UKJ0 227 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 PAXBP1Q9Y5B6 917 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 DMXL1Q9Y485 3027 aa13.23□□□□□ -0.29
TRAPPC4-205ENST00000525079 A0A1W2PQC6 194 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 LNP1A1A4G5 178 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 C2CD4BA6NLJ0 364 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 TMCO5BA8MYB1 307 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 E9PAM4 449 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 SLC30A4O14863 429 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 CLDN11O75508 207 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms