RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 APCDD1Q8J025 514 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 CARNMT1Q8N4J0 409 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 ZNF653Q96CK0 615 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 PACSIN1Q9BY11 444 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 CACNA2D2Q9NY47 1150 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 SLC8A2Q9UPR5 921 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 STON1Q9Y6Q2 735 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 PTPRZ1P23471 2315 aaPredicted RBP12.33□□□□□ -0.44
CLN8-207ENST00000524258 MUC22E2RYF6 1773 aaPredicted RBP12.33□□□□□ -0.44
CLN8-207ENST00000524258 FAM186AA6NE01 2351 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 AKR1B15C9JRZ8 316 aaPredicted RBP12.32□□□□□ -0.44
CLN8-207ENST00000524258 E9PAM4 449 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 NPC1O15118 1278 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 APBB3O95704 486 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 DLDP09622 509 aaKnown RBP12.32□□□□□ -0.44
CLN8-207ENST00000524258 PRKCHP24723 683 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 CSKP41240 450 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 CTSOP43234 321 aaPredicted RBP12.32□□□□□ -0.44
CLN8-207ENST00000524258 DGKEP52429 567 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 NRLP54845 237 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 CDH4P55283 916 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 GFPT1Q06210 699 aaPredicted RBP12.32□□□□□ -0.44
CLN8-207ENST00000524258 SRSF5Q13243 272 aaKnown RBP12.32□□□□□ -0.44
CLN8-207ENST00000524258 PLEKHG6Q3KR16 790 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 PITRM1Q5JRX3 1037 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 EOGTQ5NDL2 527 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 RABGAP1LQ5R372 815 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 CCDC122Q5T0U0 273 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 ACBD5Q5T8D3 534 aaPredicted RBP12.32□□□□□ -0.44
CLN8-207ENST00000524258 SND1Q7KZF4 910 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLN8-207ENST00000524258 NLRP14Q86W24 1093 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 AHI1Q8N157 1196 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 PYROXD2Q8N2H3 581 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 ZNF557Q8N988 423 aaPredicted RBP12.32□□□□□ -0.44
CLN8-207ENST00000524258 MDGA1Q8NFP4 955 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 CYB5D2Q8WUJ1 264 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 RPRD1AQ96P16 312 aaPredicted RBP12.32□□□□□ -0.44
CLN8-207ENST00000524258 PEBP4Q96S96 227 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 PSMB7Q99436 277 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLN8-207ENST00000524258 MPP6Q9NZW5 540 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 PPARGC1AQ9UBK2 798 aaKnown RBP12.32□□□□□ -0.44
CLN8-207ENST00000524258 OR12D3Q9UGF7 316 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 FZD10Q9ULW2 581 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 PAXBP1Q9Y5B6 917 aa12.32□□□□□ -0.44
CLN8-207ENST00000524258 ANKRD62A6NC57 917 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 LRCH4O75427 683 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 CLDN11O75508 207 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 TCF4P15884 667 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 GABRG2P18507 467 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 VASPP50552 380 aaPredicted RBP12.31□□□□□ -0.44
CLN8-207ENST00000524258 SLC12A1Q13621 1099 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 HEATR6Q6AI08 1181 aaKnown RBP12.31□□□□□ -0.44
CLN8-207ENST00000524258 DCUN1D2Q6PH85 259 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 ASCL5Q7RTU5 278 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 TRMT11Q7Z4G4 463 aaKnown RBP12.31□□□□□ -0.44
CLN8-207ENST00000524258 CNGA4Q8IV77 575 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 CHPFQ8IZ52 775 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 TSTD1Q8NFU3 115 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 TRIM11Q96F44 468 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 FEM1AQ9BSK4 669 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 CIPCQ9C0C6 399 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 EPC1Q9H2F5 836 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 NHEJ1Q9H9Q4 299 aaPredicted RBP12.31□□□□□ -0.44
CLN8-207ENST00000524258 NDFIP2Q9NV92 336 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 KIAA1522Q9P206 1035 aaPredicted RBP12.31□□□□□ -0.44
CLN8-207ENST00000524258 MYO1AQ9UBC5 1043 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 RAD54BQ9Y620 910 aa12.31□□□□□ -0.44
CLN8-207ENST00000524258 SDK1Q7Z5N4 2213 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 PRR23AA6NEV1 266 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 H0Y626 953 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 AXIN1O15169 862 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 LRIG2O94898 1065 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 HOXB2P14652 356 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 PSMA2P25787 234 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 IL1R2P27930 398 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 L1CAMP32004 1257 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 COPAP53621 1224 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 CAMK2GQ13555 558 aaPredicted RBP12.3□□□□□ -0.44
CLN8-207ENST00000524258 CDH18Q13634 790 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 CA9Q16790 459 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 SLFN11Q7Z7L1 901 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 VPS36Q86VN1 386 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 CPNE8Q86YQ8 564 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 NIPA2Q8N8Q9 360 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 KDM1BQ8NB78 822 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 UCMAQ8WVF2 138 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 MKRN2Q9H000 416 aaKnown RBP12.3□□□□□ -0.44
CLN8-207ENST00000524258 SEMA4AQ9H3S1 761 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 NOL6Q9H6R4 1146 aaKnown RBP12.3□□□□□ -0.44
CLN8-207ENST00000524258 SPTLC3Q9NUV7 552 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 SLCO3A1Q9UIG8 710 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 SCINQ9Y6U3 715 aa12.3□□□□□ -0.44
CLN8-207ENST00000524258 EML5Q05BV3 1969 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 DOCK4Q8N1I0 1966 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 CKAP5Q14008 2032 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.29□□□□□ -0.44
CLN8-207ENST00000524258 A0A0D9SEW6 157 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 TYW5A2RUC4 315 aaKnown RBP12.29□□□□□ -0.44
CLN8-207ENST00000524258 SRGAP2O75044 1071 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms