RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SRFP11831 508 aa24.86■■□□□ 1.57
PVT1-212ENST00000521951 TFDP3Q5H9I0 405 aa24.86■■□□□ 1.57
PVT1-212ENST00000521951 CARNMT1Q8N4J0 409 aa24.86■■□□□ 1.57
PVT1-212ENST00000521951 PQLC3Q8N755 202 aa24.86■■□□□ 1.57
PVT1-212ENST00000521951 NAT16Q8N8M0 369 aa24.86■■□□□ 1.57
PVT1-212ENST00000521951 RTL3Q8N8U3 475 aaKnown RBP24.86■■□□□ 1.57
PVT1-212ENST00000521951 DNASE1L2Q92874 299 aa24.86■■□□□ 1.57
PVT1-212ENST00000521951 CARD9Q9H257 536 aa24.86■■□□□ 1.57
PVT1-212ENST00000521951 RETREG1Q9H6L5 497 aa24.86■■□□□ 1.57
PVT1-212ENST00000521951 SLC2A4RGQ9NR83 387 aa24.86■■□□□ 1.57
PVT1-212ENST00000521951 ETNK2Q9NVF9 386 aa24.86■■□□□ 1.57
PVT1-212ENST00000521951 COL4A2P08572 1712 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 hCG_1818297A0A087WSY0 165 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 DCLK1O15075 740 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 LUC7L3O95232 432 aaKnown RBP24.85■■□□□ 1.57
PVT1-212ENST00000521951 KRT10P13645 584 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 CXCR5P32302 372 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 GJA4P35212 333 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 CETN2P41208 172 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 PPP2R5EQ16537 467 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 RFX6Q8HWS3 928 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.85■■□□□ 1.57
PVT1-212ENST00000521951 WFDC5Q8TCV5 224 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 MAK16Q9BXY0 300 aaKnown RBP24.85■■□□□ 1.57
PVT1-212ENST00000521951 OSBPL8Q9BZF1 889 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 NDFIP2Q9NV92 336 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 DUSP12Q9UNI6 340 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 SORCS3Q9UPU3 1222 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 NUP205Q92621 2012 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 COL4A3Q01955 1670 aa24.85■■□□□ 1.57
PVT1-212ENST00000521951 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.84■■□□□ 1.57
PVT1-212ENST00000521951 H0Y626 953 aa24.84■■□□□ 1.57
PVT1-212ENST00000521951 CACNG3O60359 315 aa24.84■■□□□ 1.57
PVT1-212ENST00000521951 CASQ1P31415 396 aa24.84■■□□□ 1.57
PVT1-212ENST00000521951 PTPN7P35236 360 aa24.84■■□□□ 1.57
PVT1-212ENST00000521951 ZNF177Q13360 481 aaPredicted RBP24.84■■□□□ 1.57
PVT1-212ENST00000521951 PAPD7Q5XG87 772 aaKnown RBP24.84■■□□□ 1.57
PVT1-212ENST00000521951 KAZNQ674X7 775 aa24.84■■□□□ 1.57
PVT1-212ENST00000521951 MFN1Q8IWA4 741 aa24.84■■□□□ 1.57
PVT1-212ENST00000521951 GJD3Q8N144 294 aa24.84■■□□□ 1.57
PVT1-212ENST00000521951 XPO6Q96QU8 1125 aaKnown RBP24.84■■□□□ 1.57
PVT1-212ENST00000521951 HEMGNQ9BXL5 484 aa24.84■■□□□ 1.57
PVT1-212ENST00000521951 CD320Q9NPF0 282 aa24.84■■□□□ 1.57
PVT1-212ENST00000521951 FBXO10Q9UK96 956 aa24.84■■□□□ 1.57
PVT1-212ENST00000521951 SNX12Q9UMY4 172 aa24.84■■□□□ 1.57
PVT1-212ENST00000521951 MFHAS1Q9Y4C4 1052 aa24.84■■□□□ 1.57
PVT1-212ENST00000521951 OR1E1P30953 314 aa24.83■■□□□ 1.57
PVT1-212ENST00000521951 MAPKAPK2P49137 400 aa24.83■■□□□ 1.57
PVT1-212ENST00000521951 PFKPQ01813 784 aa24.83■■□□□ 1.57
PVT1-212ENST00000521951 TJAP1Q5JTD0 557 aa24.83■■□□□ 1.57
PVT1-212ENST00000521951 SEL1L2Q5TEA6 688 aa24.83■■□□□ 1.57
PVT1-212ENST00000521951 C12orf40Q86WS4 652 aa24.83■■□□□ 1.57
PVT1-212ENST00000521951 ETFBKMTQ8IXQ9 262 aa24.83■■□□□ 1.57
PVT1-212ENST00000521951 FIBINQ8TAL6 211 aa24.83■■□□□ 1.57
PVT1-212ENST00000521951 OSBPL9Q96SU4 736 aa24.83■■□□□ 1.57
PVT1-212ENST00000521951 HERPUD2Q9BSE4 406 aa24.83■■□□□ 1.57
PVT1-212ENST00000521951 TBC1D30Q9Y2I9 924 aa24.83■■□□□ 1.57
PVT1-212ENST00000521951 MIA3Q5JRA6 1907 aa24.83■■□□□ 1.57
PVT1-212ENST00000521951 ESPNB1AK53 854 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 TUBB4AP04350 444 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 SLC6A11P48066 632 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 SOX9P48436 509 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 ADCY2Q08462 1091 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 CDH18Q13634 790 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 FSCBQ5H9T9 825 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 SLC9A4Q6AI14 798 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 ASTLQ6HA08 431 aaPredicted RBP24.82■■□□□ 1.56
PVT1-212ENST00000521951 CXorf57Q6NSI4 855 aaKnown RBP24.82■■□□□ 1.56
PVT1-212ENST00000521951 TMCO3Q6UWJ1 677 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 CCDC117Q8IWD4 279 aaPredicted RBP24.82■■□□□ 1.56
PVT1-212ENST00000521951 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.82■■□□□ 1.56
PVT1-212ENST00000521951 CHFRQ96EP1 664 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 PBKQ96KB5 322 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 NECAB3Q96P71 396 aaPredicted RBP24.82■■□□□ 1.56
PVT1-212ENST00000521951 SLC2A11Q9BYW1 496 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 PRDM16Q9HAZ2 1276 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 HEBP1Q9NRV9 189 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 EFR3BQ9Y2G0 817 aa24.82■■□□□ 1.56
PVT1-212ENST00000521951 KIF2AO00139 706 aaPredicted RBP24.81■■□□□ 1.56
PVT1-212ENST00000521951 TULP3O75386 442 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 OPRD1P41143 372 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 TFDP2Q14188 446 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 IER5LQ5T953 404 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 NCBP2-AS2Q69YL0 99 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 SETD3Q86TU7 594 aaPredicted RBP24.81■■□□□ 1.56
PVT1-212ENST00000521951 OR52K2Q8NGK3 314 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 KLC2Q9H0B6 622 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 DNAJC17Q9NVM6 304 aaKnown RBP24.81■■□□□ 1.56
PVT1-212ENST00000521951 DONSONQ9NYP3 566 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 TRIM24O15164 1050 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 CEP104O60308 925 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 CST8O60676 142 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 CISD3P0C7P0 127 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 PRLRP16471 622 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 UMODL1-AS1Q8N2C9 162 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 PLD5Q8N7P1 536 aa24.81■■□□□ 1.56
PVT1-212ENST00000521951 NOL6Q9H6R4 1146 aaKnown RBP24.81■■□□□ 1.56
PVT1-212ENST00000521951 CHD5Q8TDI0 1954 aa24.8■■□□□ 1.56
PVT1-212ENST00000521951 APOL1O14791 398 aa24.8■■□□□ 1.56
PVT1-212ENST00000521951 RHOCP08134 193 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms