RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 FAM205BPQ63HN1 556 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 ATF7IPQ6VMQ6 1270 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 BCDIN3DQ7Z5W3 292 aaKnown RBP5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 ADSSL1Q8N142 457 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 SLC44A3Q8N4M1 653 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 PDILTQ8N807 584 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 MAFAQ8NHW3 353 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 ACTRT2Q8TDY3 377 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 NCSTNQ92542 709 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 HIC2Q96JB3 615 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 CIPCQ9C0C6 399 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 CTDSP1Q9GZU7 261 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 SLC2A4RGQ9NR83 387 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 TLR8Q9NR97 1041 aaKnown RBP5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 GPR34Q9UPC5 381 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 TTLL3Q9Y4R7 772 aa5.8□□□□□ -1.48
HMGB1P46-201ENST00000520062 SPATA31A5Q5VU36 1347 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 SPATA31A6Q5VVP1 1343 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 SPATA31A7Q8IWB4 1347 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 TEX22C9J3V5 150 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 PRYO14603 147 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 FYB1O15117 783 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 MT-CO3P00414 261 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 ACADMP11310 421 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 UBL4AP11441 157 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 LYL1P12980 280 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 HOXB9P17482 250 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 HNF1BP35680 557 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 MPLP40238 635 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 CCT8P50990 548 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 ARHGAP8P85298 464 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 B4GALNT1Q00973 533 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 EFEMP1Q12805 493 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 FOXE3Q13461 319 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 GAB1Q13480 694 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 MFSD13AQ14CX5 517 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 NAA25Q14CX7 972 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 SNX30Q5VWJ9 437 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 LAIR1Q6GTX8 287 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 GJB7Q6PEY0 223 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 SLC22A25Q6T423 547 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 KRBA2Q6ZNG9 492 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 TERB1Q8NA31 727 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 ETNPPLQ8TBG4 499 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 CREB3L4Q8TEY5 395 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 KCNJ9Q92806 393 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 ATP2A3Q93084 1043 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 C5orf34Q96MH7 638 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 SERINC2Q96SA4 455 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 NUDT16L1Q9BRJ7 211 aaKnown RBP5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 NPLQ9BXD5 320 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 TRIM31Q9BZY9 425 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 ZDHHC7Q9NXF8 308 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 KCND2Q9NZV8 630 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 CAMK2AQ9UQM7 478 aa5.79□□□□□ -1.48
HMGB1P46-201ENST00000520062 BTBD19C9JJ37 291 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 TNFSF14O43557 240 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 TIPRLO75663 272 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 CNTN5O94779 1100 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 PDE8BO95263 885 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 SGPL1O95470 568 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 ALDOCP09972 364 aaKnown RBP5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 LAMP2P13473 410 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 PKMP14618 531 aaKnown RBP5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 ATF7P17544 494 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 DRD4P21917 467 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 GJC1P36383 396 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 ZNF84P51523 738 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 ADPRHP54922 357 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 DMWDQ09019 674 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 BYSLQ13895 437 aaKnown RBP5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 LARS2Q15031 903 aaKnown RBP5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 TBCEQ15813 527 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 Q6YL49 198 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 CPLX4Q7Z7G2 160 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 BRSK2Q8IWQ3 736 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 RPAP2Q8IXW5 612 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 METTL6Q8TCB7 284 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 RUFY2Q8WXA3 655 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 RAB40AQ8WXH6 277 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 CUL5Q93034 780 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 ERP27Q96DN0 273 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 PDLIM2Q96JY6 352 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 HS6ST2Q96MM7 605 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 GPR78Q96P69 363 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 NR1H4Q96RI1 486 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 EYA3Q99504 573 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 CLSTN3Q9BQT9 956 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 SDF4Q9BRK5 362 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 TRIM2Q9C040 744 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 SLC25A18Q9H1K4 315 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 CCDC68Q9H2F9 335 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 TTC12Q9H892 705 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 DIAPH3Q9NSV4 1193 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 SLC25A13Q9UJS0 675 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 SARDHQ9UL12 918 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 REXO2Q9Y3B8 237 aaKnown RBP5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 PKP3Q9Y446 797 aa5.78□□□□□ -1.48
HMGB1P46-201ENST00000520062 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms