RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 CMPK2Q5EBM0 449 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 XKR4Q5GH76 650 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 MAP1SQ66K74 1059 aaPredicted RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 TLDC1Q6P9B6 456 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 ZNF449Q6P9G9 518 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 MTHFD1LQ6UB35 978 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 OLFML1Q6UWY5 402 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 ALKAL1Q6UXT8 129 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 SCARA5Q6ZMJ2 495 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 TIFABQ6ZNK6 161 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 FAM183BPQ6ZVS7 135 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 USP50Q70EL3 339 aaPredicted RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 ARMCX2Q7L311 632 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 SLC26A9Q7LBE3 791 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 BNIPLQ7Z465 357 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 APBB1IPQ7Z5R6 666 aaPredicted RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 SESTD1Q86VW0 696 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 RFX6Q8HWS3 928 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 PSTKQ8IV42 348 aaKnown RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 MAP7D3Q8IWC1 876 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 UNC45BQ8IWX7 931 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 CRYBG2Q8N1P7 616 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 PQLC3Q8N755 202 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 PLD5Q8N7P1 536 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 KCTD6Q8NC69 237 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 FBXO36Q8NEA4 188 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 RAB3IL1Q8TBN0 382 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 MGARPQ8TDB4 240 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 LRRC8CQ8TDW0 803 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 FBF1Q8TES7 1133 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 PYROXD1Q8WU10 500 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 SLC35F5Q8WV83 523 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 RXFP2Q8WXD0 754 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 ZNF75CPQ92670 426 aaPredicted RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 DCPSQ96C86 337 aaKnown RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 HPDLQ96IR7 371 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 SNX27Q96L92 541 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 NLRP4Q96MN2 994 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 CYTH2Q99418 400 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 PAFAH2Q99487 392 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 ADPGKQ9BRR6 497 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 C16orf70Q9BSU1 422 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 TUBB6Q9BUF5 446 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 NT5C1AQ9BXI3 368 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 MAK16Q9BXY0 300 aaKnown RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 R3HDMLQ9H3Y0 253 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 RNPEPQ9H4A4 650 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 GSX1Q9H4S2 264 aaPredicted RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 TUT1Q9H6E5 874 aaKnown RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 VPS37BQ9H9H4 285 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 PCDH18Q9HCL0 1135 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 SLC5A4Q9NY91 659 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 RCOR3Q9P2K3 495 aaPredicted RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 MORF4L1Q9UBU8 362 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 HMGXB4Q9UGU5 601 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 TBK1Q9UHD2 729 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 LNPEPQ9UIQ6 1025 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 MCM8Q9UJA3 840 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 CHKBQ9Y259 395 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 SF3B1O75533 1304 aaKnown RBP eCLIP5.22□□□□□ -1.57
SDC2-204ENST00000519914 A0A087WZ62 844 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 A0A1W2PPM1 405 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 RRN3P2A6NIE6 340 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 HACD1B0YJ81 288 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 ADM5C9JUS6 153 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 E5RJQ4 531 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 POC1B-GALNT4F8VUJ3 575 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 IGF2BP3O00425 579 aaKnown RBP eCLIP5.22□□□□□ -1.576e-9■■■■■ 28.3
SDC2-204ENST00000519914 APOL1O14791 398 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 TMPRSS2O15393 492 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 STRNO43815 780 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 PEX10O60683 326 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 ICMTO60725 284 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 GCATO75600 419 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 IFNB1P01574 187 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 PGK2P07205 417 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 CD8BP10966 210 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 FGFR1P11362 822 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 MLNP12872 115 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 EZRP15311 586 aaKnown RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 PDGFRAP16234 1089 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 KRT15P19012 456 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 CCND1P24385 295 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 AXLP30530 894 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 ALDH3A1P30838 453 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 SSTR1P30872 391 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 RPA3P35244 121 aaPredicted RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 PEX19P40855 299 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 MSH2P43246 934 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 ACADSBP45954 432 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 SERPINB4P48594 390 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 NDST1P52848 882 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 CDH6P55285 790 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 CDH8P55286 799 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 KCNJ2P63252 427 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 ZNF200P98182 395 aaPredicted RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 CDK16Q00536 496 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 SLC6A3Q01959 620 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 DNAJC3Q13217 504 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms