RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 DPCR1Q3MIW9 517 aa26.15■■□□□ 1.78
VEGFA-220ENST00000519767 C9orf64Q5T6V5 341 aa26.15■■□□□ 1.78
VEGFA-220ENST00000519767 SLC26A9Q7LBE3 791 aa26.15■■□□□ 1.78
VEGFA-220ENST00000519767 SLC47A2Q86VL8 602 aa26.15■■□□□ 1.78
VEGFA-220ENST00000519767 C1orf131Q8NDD1 294 aaKnown RBP26.15■■□□□ 1.78
VEGFA-220ENST00000519767 GANCQ8TET4 914 aa26.15■■□□□ 1.78
VEGFA-220ENST00000519767 PABPC3Q9H361 631 aaKnown RBP26.15■■□□□ 1.78
VEGFA-220ENST00000519767 PCDHB9Q9Y5E1 797 aa26.15■■□□□ 1.78
VEGFA-220ENST00000519767 SIN3BO75182 1162 aa26.14■■□□□ 1.78
VEGFA-220ENST00000519767 NOS2P35228 1153 aa26.14■■□□□ 1.78
VEGFA-220ENST00000519767 PLK1P53350 603 aa26.14■■□□□ 1.78
VEGFA-220ENST00000519767 TEAD4Q15561 434 aa26.14■■□□□ 1.78
VEGFA-220ENST00000519767 MIIPQ5JXC2 388 aa26.14■■□□□ 1.78
VEGFA-220ENST00000519767 OLFML1Q6UWY5 402 aa26.14■■□□□ 1.78
VEGFA-220ENST00000519767 FAM183BPQ6ZVS7 135 aa26.14■■□□□ 1.78
VEGFA-220ENST00000519767 CCAR2Q8N163 923 aaKnown RBP26.14■■□□□ 1.78
VEGFA-220ENST00000519767 ZNF397Q8NF99 534 aaPredicted RBP26.14■■□□□ 1.78
VEGFA-220ENST00000519767 SNX19Q92543 992 aa26.14■■□□□ 1.78
VEGFA-220ENST00000519767 PDCL3Q9H2J4 239 aa26.14■■□□□ 1.78
VEGFA-220ENST00000519767 MTG2Q9H4K7 406 aa26.14■■□□□ 1.78
VEGFA-220ENST00000519767 FBXL12Q9NXK8 326 aa26.14■■□□□ 1.78
VEGFA-220ENST00000519767 ITIH6Q6UXX5 1313 aa26.14■■□□□ 1.77
VEGFA-220ENST00000519767 SH3BP5O60239 455 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 GRAP2O75791 330 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 PROS1P07225 676 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 CD27P26842 260 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 MATKP42679 507 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 TRIP6Q15654 476 aaKnown RBP26.13■■□□□ 1.77
VEGFA-220ENST00000519767 ZNF423Q2M1K9 1284 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 DPY19L2P1Q6NXN4 242 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 DHX40Q8IX18 779 aaKnown RBP26.13■■□□□ 1.77
VEGFA-220ENST00000519767 APCDD1Q8J025 514 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 TMEM35BQ8NCS4 154 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 BIRC7Q96CA5 298 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 SCNM1Q9BWG6 230 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 GAREM1Q9H706 876 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 SLCO3A1Q9UIG8 710 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 AJAP1Q9UKB5 411 aaPredicted RBP26.13■■□□□ 1.77
VEGFA-220ENST00000519767 KNL1Q8NG31 2342 aa26.13■■□□□ 1.77
VEGFA-220ENST00000519767 SYNJ2BP-COX16A0A087WUM0 186 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 A0A1B0GVM2 712 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 TCAF2A6NFQ2 919 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 TTC34A8MYJ7 566 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 ERBB2P04626 1255 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 CTSOP43234 321 aaPredicted RBP26.12■■□□□ 1.77
VEGFA-220ENST00000519767 CSNK1EP49674 416 aaKnown RBP26.12■■□□□ 1.77
VEGFA-220ENST00000519767 DRAP1Q14919 205 aaPredicted RBP26.12■■□□□ 1.77
VEGFA-220ENST00000519767 CST6Q15828 149 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 HLA-BQ31612 363 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 KLHDC7AQ5VTJ3 777 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 FBXL22Q6P050 247 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 LRSAM1Q6UWE0 723 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 CLEC17AQ6ZS10 378 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 NAXDQ8IW45 347 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 COX16Q9P0S2 106 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 ADAMTS9Q9P2N4 1935 aa26.12■■□□□ 1.77
VEGFA-220ENST00000519767 PES1O00541 588 aaKnown RBP26.11■■□□□ 1.77
VEGFA-220ENST00000519767 DAB1O75553 588 aa26.11■■□□□ 1.77
VEGFA-220ENST00000519767 FSBPO95073 299 aa26.11■■□□□ 1.77
VEGFA-220ENST00000519767 EEF1GP26641 437 aaKnown RBP26.11■■□□□ 1.77
VEGFA-220ENST00000519767 VASPP50552 380 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-220ENST00000519767 NME3Q13232 169 aa26.11■■□□□ 1.77
VEGFA-220ENST00000519767 AUHQ13825 339 aaKnown RBP26.11■■□□□ 1.77
VEGFA-220ENST00000519767 RAPGEF1Q13905 1077 aa26.11■■□□□ 1.77
VEGFA-220ENST00000519767 KCNJ12Q14500 433 aa26.11■■□□□ 1.77
VEGFA-220ENST00000519767 PTPN20Q4JDL3 420 aa26.11■■□□□ 1.77
VEGFA-220ENST00000519767 RPRD1AQ96P16 312 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-220ENST00000519767 OMDQ99983 421 aa26.11■■□□□ 1.77
VEGFA-220ENST00000519767 ADAM33Q9BZ11 813 aa26.11■■□□□ 1.77
VEGFA-220ENST00000519767 ADAMTS1Q9UHI8 967 aa26.11■■□□□ 1.77
VEGFA-220ENST00000519767 FZD4Q9ULV1 537 aa26.11■■□□□ 1.77
VEGFA-220ENST00000519767 NEUROG3Q9Y4Z2 214 aa26.11■■□□□ 1.77
VEGFA-220ENST00000519767 PCDHGB2Q9Y5G2 931 aa26.11■■□□□ 1.77
VEGFA-220ENST00000519767 CHD6Q8TD26 2715 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-220ENST00000519767 A0A1B0GVT2 93 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 LRRC72A6NJI9 287 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 M0QYT0 321 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 F9P00740 461 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 CYP11B1P15538 503 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 SLC8A1P32418 973 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 CDH5P33151 784 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-220ENST00000519767 SCNN1AP37088 669 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 GRIA4P48058 902 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 FAM193AP78312 1265 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 BNC1Q01954 994 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 KCNMA1Q12791 1236 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 ZNF177Q13360 481 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-220ENST00000519767 SUZ12Q15022 739 aaKnown RBP26.1■■□□□ 1.77
VEGFA-220ENST00000519767 TCP11X2Q5H9J9 407 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 ACBD5Q5T8D3 534 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-220ENST00000519767 KIAA0895LQ68EN5 471 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 UNQ6494/PRO21346Q6UXR6 183 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 MMAAQ8IVH4 418 aaKnown RBP26.1■■□□□ 1.77
VEGFA-220ENST00000519767 C18orf8Q96DM3 657 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 RPL10LQ96L21 214 aaKnown RBP26.1■■□□□ 1.77
VEGFA-220ENST00000519767 FAM129BQ96TA1 746 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 TM9SF3Q9HD45 589 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 TM7SF3Q9NS93 570 aa26.1■■□□□ 1.77
VEGFA-220ENST00000519767 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.1■■□□□ 1.774e-6■□□□□ 10.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms