RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 PCDHB7Q9Y5E2 793 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 PCDHB5Q9Y5E4 795 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 A0A1W2PQH9 124 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 ARHGAP42A6NI28 874 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 AP3B1O00203 1094 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 DFFAO00273 331 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 ZBTB24O43167 697 aaPredicted RBP8.64□□□□□ -1.03
HMGB4-203ENST00000519684 PSMD3O43242 534 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 B4GALT3O60512 393 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 DNAJC8O75937 253 aaPredicted RBP8.64□□□□□ -1.03
HMGB4-203ENST00000519684 ALDH1A2O94788 518 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 CRADDP78560 199 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 ZNF33AQ06730 810 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 BMPR2Q13873 1038 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 PPP2R5DQ14738 602 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 CRYMQ14894 314 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 SETDB1Q15047 1291 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 CTXN3Q4LDR2 81 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 VARS2Q5ST30 1063 aaKnown RBP8.64□□□□□ -1.03
HMGB4-203ENST00000519684 LHX8Q68G74 356 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 ZNF280DQ6N043 979 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 CHSY1Q86X52 802 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 CEP57Q86XR8 500 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 TRIM42Q8IWZ5 723 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 NUP93Q8N1F7 819 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 ATPAF2Q8N5M1 289 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 LZTR1Q8N653 840 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 CELF6Q96J87 481 aaKnown RBP8.64□□□□□ -1.03
HMGB4-203ENST00000519684 FAM111AQ96PZ2 611 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 SRPK1Q96SB4 655 aaKnown RBP8.64□□□□□ -1.03
HMGB4-203ENST00000519684 TRIM56Q9BRZ2 755 aaKnown RBP8.64□□□□□ -1.03
HMGB4-203ENST00000519684 SEZ6LQ9BYH1 1024 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 ELAC1Q9H777 363 aaKnown RBP8.64□□□□□ -1.03
HMGB4-203ENST00000519684 MANSC1Q9H8J5 431 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 LRRC40Q9H9A6 602 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 RXFP1Q9HBX9 757 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 PIH1D1Q9NWS0 290 aaKnown RBP8.64□□□□□ -1.03
HMGB4-203ENST00000519684 SYBUQ9NX95 663 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 MOCS1Q9NZB8 636 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 DNAJB4Q9UDY4 337 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 SFMBT1Q9UHJ3 866 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 PHF24Q9UPV7 400 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 SCML2Q9UQR0 700 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 USH1CQ9Y6N9 552 aa8.64□□□□□ -1.03
HMGB4-203ENST00000519684 OR6C75A6NL08 312 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 MSI1O43347 362 aaKnown RBP8.63□□□□□ -1.03
HMGB4-203ENST00000519684 UGT1A9O60656 530 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 PAGE1O75459 146 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 UBOX5O94941 541 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 SLC2A3P11169 496 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 NFKB1P19838 968 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 GRK4P32298 578 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 CCNFP41002 786 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 MGAT5Q09328 741 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 TEX44Q53QW1 395 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 SCD5Q86SK9 330 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 MON1AQ86VX9 555 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 OR52K1Q8NGK4 314 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 CASP10Q92851 521 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 C8orf48Q96LL4 319 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.63□□□□□ -1.03
HMGB4-203ENST00000519684 UGT1A7Q9HAW7 530 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 UGT1A10Q9HAW8 530 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 UGT1A8Q9HAW9 530 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 SLCO1B3Q9NPD5 702 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 MKS1Q9NXB0 559 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 ADAM28Q9UKQ2 775 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 VANGL2Q9ULK5 521 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 SLC12A4Q9UP95 1085 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 PLXNA3P51805 1871 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 DCTN3O75935 186 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 NEBLO76041 1014 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 MOCS2O96007 188 aaPredicted RBP8.63□□□□□ -1.03
HMGB4-203ENST00000519684 JCHAINP01591 159 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 CCNCP24863 283 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 MAGEA11P43364 429 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 PRMT2P55345 433 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 NIPAL4Q0D2K0 466 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 CCDC15Q0P6D6 951 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 ZBTB17Q13105 803 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 SPRED3Q2MJR0 410 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 MROH9Q5TGP6 573 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 FAM171A1Q5VUB5 890 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 SH2D5Q6ZV89 423 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 SEPT8Q92599 483 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 THOC1Q96FV9 657 aaKnown RBP8.63□□□□□ -1.03
HMGB4-203ENST00000519684 OXNAD1Q96HP4 312 aaPredicted RBP8.63□□□□□ -1.03
HMGB4-203ENST00000519684 FCRL2Q96LA5 508 aaPredicted RBP8.63□□□□□ -1.03
HMGB4-203ENST00000519684 PPP1R2P1Q96PQ5 205 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 TSSK1BQ9BXA7 367 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 SLC13A1Q9BZW2 595 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 C12orf65Q9H3J6 166 aaKnown RBP8.63□□□□□ -1.03
HMGB4-203ENST00000519684 ALG13Q9NP73 1137 aaKnown RBP8.63□□□□□ -1.03
HMGB4-203ENST00000519684 PCMTD2Q9NV79 361 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 ZFATQ9P243 1243 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 GGT7Q9UJ14 662 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 RPS6KL1Q9Y6S9 549 aa8.63□□□□□ -1.03
HMGB4-203ENST00000519684 SHROOM3Q8TF72 1996 aa8.62□□□□□ -1.03
HMGB4-203ENST00000519684 HOXA2O43364 376 aa8.62□□□□□ -1.03
HMGB4-203ENST00000519684 FKTNO75072 461 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms