RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 AIF1P55008 147 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 ADIGQ0VDE8 80 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 PAFAH1B3Q15102 231 aaKnown RBP11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 SV2CQ496J9 727 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 PPM1JQ5JR12 505 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 RNF220Q5VTB9 566 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 RSPH3Q86UC2 560 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 KBTBD2Q8IY47 623 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 POU5F2Q8N7G0 328 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 TSNARE1Q96NA8 513 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 KCNK16Q96T55 309 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 LPIN3Q9BQK8 851 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 CDH22Q9UJ99 828 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 PPM1HQ9ULR3 514 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 ZNF638Q14966 1978 aaKnown RBP11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 PDCD11Q14690 1871 aaKnown RBP11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 SYNJ2BP-COX16A0A087WUM0 186 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 M0QYT0 321 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 AP3B1O00203 1094 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 PIRO00625 290 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 CLGNO14967 610 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 TIMM44O43615 452 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 USP1O94782 785 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 APOA4P06727 396 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 LYNP07948 512 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 UBTFL6P0CB48 400 aaPredicted RBP11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 LMO2P25791 158 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 HOXA11P31270 313 aaPredicted RBP11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 HADHAP40939 763 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 ERFP50548 548 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 LIMK2P53671 638 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 CDC16Q13042 620 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 ALKAL1Q6UXT8 129 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 STRA8Q7Z7C7 330 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 PIGZQ86VD9 579 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 SIX6OS1Q8N1H7 587 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 DCLK2Q8N568 766 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 GTF3C2Q8WUA4 911 aaPredicted RBP11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 KBTBD7Q8WVZ9 684 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 ISL2Q96A47 359 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 ZNF669Q96BR6 464 aaPredicted RBP11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 DUSP16Q9BY84 665 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 CEP41Q9BYV8 373 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 KLHL4Q9C0H6 718 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 BRD8Q9H0E9 1235 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 ADARB2Q9NS39 739 aaKnown RBP11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 COX16Q9P0S2 106 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 VANGL2Q9ULK5 521 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 SCN4AP35499 1836 aa11.61□□□□□ -0.55
NUDCD1-203ENST00000519607 ADM5C9JUS6 153 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 TRIM13O60858 407 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 RECQL4O94761 1208 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 AP2A1O95782 977 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 GNAT1P11488 350 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 CYP2C9P11712 490 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 AXLP30530 894 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 SERPINB6P35237 376 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 NME3Q13232 169 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 MED21Q13503 144 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 CUL3Q13618 768 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 FRG1Q14331 258 aaKnown RBP11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 DGKDQ16760 1214 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 MARCH8Q5T0T0 291 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 DLK2Q6UY11 383 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 DEFB107AQ8IZN7 70 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 OR52K1Q8NGK4 314 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 OR6Y1Q8NGX8 325 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 PYDC1Q8WXC3 89 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 WNT8BQ93098 351 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 SLC9A7Q96T83 725 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 SERPINI1Q99574 410 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 HNRNPABQ99729 332 aaKnown RBP11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 EIF2AQ9BY44 585 aaKnown RBP11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 CDH19Q9H159 772 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 COG4Q9H9E3 785 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 CYP4F11Q9HBI6 524 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 HES2Q9Y543 173 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 A0A096LPK6 155 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 LOC100653049A0A140TA62 436 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 RBM47A0AV96 593 aaKnown RBP11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 KRT34O76011 436 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 COX4I1P13073 169 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 ADCYAP1R1P41586 468 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 MAGEA12P43365 314 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 NPY2RP49146 381 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 HK2P52789 917 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 HNRNPDQ14103 355 aaKnown RBP11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 RALGPS1Q5JS13 557 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 THEMIS2Q5TEJ8 643 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 ITPRIPL1Q6GPH6 555 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 FSTL4Q6MZW2 842 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 PGM2L1Q6PCE3 622 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 EPGNQ6UW88 154 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 CES3Q6UWW8 571 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 TMEM135Q86UB9 458 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 MFN1Q8IWA4 741 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 ST13P4Q8IZP2 240 aaPredicted RBP11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 FBXW8Q8N3Y1 598 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 B3GALNT2Q8NCR0 500 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 PIP4K2CQ8TBX8 421 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms