RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 RBM5P52756 815 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPN12-213ENST00000519553 ADPRHP54922 357 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 SLC12A2P55011 1212 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 TMEM95Q3KNT9 176 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 Q4G0T1 1027 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 MTX3Q5HYI7 312 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 ZNF484Q5JVG2 852 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 KIAA1755Q5JYT7 1200 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 LIPMQ5VYY2 423 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 DEF8Q6ZN54 512 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 C2CD5Q86YS7 1000 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 ENDOVQ8N8Q3 282 aaKnown RBP6.8□□□□□ -1.32
PTPN12-213ENST00000519553 BCAS4Q8TDM0 211 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 KAT2BQ92831 832 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 GCC1Q96CN9 775 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 SCNM1Q9BWG6 230 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 HDHD5Q9BXW7 423 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 CHODLQ9H9P2 273 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 NRIP3Q9NQ35 241 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 RASSF1Q9NS23 344 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 BTBD3Q9Y2F9 522 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 PKP3Q9Y446 797 aa6.8□□□□□ -1.32
PTPN12-213ENST00000519553 COL3A1P02461 1466 aaPredicted RBP6.79□□□□□ -1.32
PTPN12-213ENST00000519553 NPIPB13A6NJU9 1138 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 NPIPB5A8MRT5 1133 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 NPIPB4C9JG80 1138 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 MCIDASD6RGH6 385 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 CNOT3O75175 753 aaKnown RBP6.79□□□□□ -1.32
PTPN12-213ENST00000519553 WNT1P04628 370 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 CTSAP10619 480 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 LYL1P12980 280 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 ABCG1P45844 678 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 RPS13P62277 151 aaKnown RBP6.79□□□□□ -1.32
PTPN12-213ENST00000519553 EFR3AQ14156 821 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 FSIP1Q8NA03 581 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 VOPP1Q96AW1 172 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 PIMREGQ9BSJ6 248 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 CLPBQ9H078 707 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 RMI1Q9H9A7 625 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 TMEM184CQ9NVA4 438 aa6.79□□□□□ -1.32
PTPN12-213ENST00000519553 LOC102724159A0A0B4J2E5 919 aa6.78□□□□□ -1.32
PTPN12-213ENST00000519553 DNAJC9-AS1A6NH13 148 aa6.78□□□□□ -1.32
PTPN12-213ENST00000519553 USP12O75317 370 aa6.78□□□□□ -1.32
PTPN12-213ENST00000519553 CD63P08962 238 aa6.78□□□□□ -1.32
PTPN12-213ENST00000519553 HSD3B1P14060 373 aa6.78□□□□□ -1.32
PTPN12-213ENST00000519553 ZNF91Q05481 1191 aa6.78□□□□□ -1.32
PTPN12-213ENST00000519553 STIM1Q13586 685 aa6.78□□□□□ -1.32
PTPN12-213ENST00000519553 KLF9Q13886 244 aaPredicted RBP6.78□□□□□ -1.32
PTPN12-213ENST00000519553 PWP2Q15269 919 aaKnown RBP6.78□□□□□ -1.32
PTPN12-213ENST00000519553 COQ8BQ96D53 544 aa6.78□□□□□ -1.32
PTPN12-213ENST00000519553 ADAD1Q96M93 576 aaKnown RBP6.78□□□□□ -1.32
PTPN12-213ENST00000519553 IL21RQ9HBE5 538 aa6.78□□□□□ -1.32
PTPN12-213ENST00000519553 SAGE1Q9NXZ1 904 aa6.78□□□□□ -1.32
PTPN12-213ENST00000519553 DERAQ9Y315 318 aa6.78□□□□□ -1.32
PTPN12-213ENST00000519553 STX16-NPEPL1H3BU86 382 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 STX16O14662 325 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 TLR2O60603 784 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 RXRAP19793 462 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 PNPLA4P41247 253 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 ID2Q02363 134 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 SEMA3AQ14563 771 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 ARL13AQ5H913 290 aaPredicted RBP6.77□□□□□ -1.33
PTPN12-213ENST00000519553 FAM57BQ71RH2 274 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 TMEM200AQ86VY9 491 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 SCN4BQ8IWT1 228 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 TMEM57Q8N5G2 664 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 FAM47BQ8NA70 645 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 LINS1Q8NG48 757 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 CEP70Q8NHQ1 597 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 FAM110DQ8TAY7 271 aaPredicted RBP6.77□□□□□ -1.33
PTPN12-213ENST00000519553 IP6K1Q92551 441 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 KAT2AQ92830 837 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 TRIM63Q969Q1 353 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 PYM1Q9BRP8 204 aaKnown RBP6.77□□□□□ -1.33
PTPN12-213ENST00000519553 PI4KBQ9UBF8 816 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 FBXO4Q9UKT5 387 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 DTX4Q9Y2E6 619 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 DNAJC16Q9Y2G8 782 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 PCSK5Q92824 1860 aa6.77□□□□□ -1.33
PTPN12-213ENST00000519553 SEPT4O43236 478 aa6.76□□□□□ -1.33
PTPN12-213ENST00000519553 TOP3BO95985 862 aaKnown RBP6.76□□□□□ -1.33
PTPN12-213ENST00000519553 CPA2P48052 419 aa6.76□□□□□ -1.33
PTPN12-213ENST00000519553 CCT5P48643 541 aa6.76□□□□□ -1.33
PTPN12-213ENST00000519553 PAPOLAP51003 745 aaKnown RBP6.76□□□□□ -1.33
PTPN12-213ENST00000519553 RHAGQ02094 409 aa6.76□□□□□ -1.33
PTPN12-213ENST00000519553 ZBTB16Q05516 673 aa6.76□□□□□ -1.33
PTPN12-213ENST00000519553 THOC5Q13769 683 aaKnown RBP6.76□□□□□ -1.33
PTPN12-213ENST00000519553 C10orf25Q5T742 122 aa6.76□□□□□ -1.33
PTPN12-213ENST00000519553 ANKRD45Q5TZF3 282 aa6.76□□□□□ -1.33
PTPN12-213ENST00000519553 MTFR2Q6P444 385 aa6.76□□□□□ -1.33
PTPN12-213ENST00000519553 ANKRD18AQ8IVF6 992 aa6.76□□□□□ -1.33
PTPN12-213ENST00000519553 CPXCR1Q8N123 301 aa6.76□□□□□ -1.33
PTPN12-213ENST00000519553 CUL5Q93034 780 aa6.76□□□□□ -1.33
PTPN12-213ENST00000519553 FRMD8Q9BZ67 464 aaPredicted RBP6.76□□□□□ -1.33
PTPN12-213ENST00000519553 PAPOLBQ9NRJ5 636 aaKnown RBP6.76□□□□□ -1.33
PTPN12-213ENST00000519553 ZNF70Q9UC06 446 aaPredicted RBP6.76□□□□□ -1.33
PTPN12-213ENST00000519553 WDR91A4D1P6 747 aa6.75□□□□□ -1.33
PTPN12-213ENST00000519553 KCNJ18B7U540 433 aa6.75□□□□□ -1.33
PTPN12-213ENST00000519553 EIF3FO00303 357 aaPredicted RBP6.75□□□□□ -1.33
PTPN12-213ENST00000519553 CKMT1AP12532 417 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms