RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 KCNK13Q9HB14 408 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 KIAA1586Q9HCI6 787 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 HMG20AQ9NP66 347 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 WASH6PQ9NQA3 447 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 POLE3Q9NRF9 147 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 PARVAQ9NVD7 372 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 DNAJC17Q9NVM6 304 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 NPAP1Q9NZP6 1156 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 NCKIPSDQ9NZQ3 722 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 GABBR1Q9UBS5 961 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 SFMBT1Q9UHJ3 866 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 POLG2Q9UHN1 485 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TCEAL9Q9UHQ7 104 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 DUSP13Q9UII6 198 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 DBNLQ9UJU6 430 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 APPL1Q9UKG1 709 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 GRID1Q9ULK0 1009 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 ARHGAP26Q9UNA1 814 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC8A2Q9UPR5 921 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 SORCS3Q9UPU3 1222 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 REXO2Q9Y3B8 237 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 RWDD3Q9Y3V2 267 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 PCDHGA3Q9Y5H0 932 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 CEPT1Q9Y6K0 416 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 ATP8B3O60423 1300 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 FLT1P17948 1338 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 DUOX2Q9NRD8 1548 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 C15orf38-AP3S2A0A0A6YYH1 394 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 C1orf232A0A0U1RR37 186 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 TLDC2A0PJX2 215 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ISPDA4D126 451 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 LGALS16A8MUM7 142 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 CAPN14A8MX76 684 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 H7C0C1 242 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 K7EPI3 171 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 PGRMC1O00264 195 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 BTN3A1O00481 513 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 PRRG2O14669 202 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC9A3R1O14745 358 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 RAD51CO43502 376 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 NDUFA2O43678 99 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ACSL4O60488 711 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 CCNT1O60563 726 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SNAP91O60641 907 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 RNASEH1O60930 286 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 TCEA3O75764 348 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 KRT36O76013 467 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 FGF18O76093 207 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 BMP10O95393 424 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 BAG2O95816 211 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 FUCA1P04066 466 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SHBGP04278 402 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 EEF2P13639 858 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 GLULP15104 373 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ITGA2P17301 1181 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 F8A1P23610 371 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 RRM1P23921 792 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 PTX3P26022 381 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 AXLP30530 894 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SERPINB1P30740 379 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC5A2P31639 672 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 HNF1BP35680 557 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 NR2C2P49116 596 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 CLK3P49761 638 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ENTPD1P49961 510 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 RAB14P61106 215 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ACTR3P61158 418 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 PHC1P78364 1004 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 CYP4F8P98187 520 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZBTB16Q05516 673 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 MOGSQ13724 837 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 THOC5Q13769 683 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 OXA1LQ15070 435 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 KRT31Q15323 416 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 RPS6KA1Q15418 735 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SF3B4Q15427 424 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 UAP1Q16222 522 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZBED5Q49AG3 693 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 AASDHQ4L235 1098 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 EARS2Q5JPH6 523 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC10A5Q5PT55 438 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 RARS2Q5T160 578 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC9C2Q5TAH2 1124 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ARHGEF16Q5VV41 709 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLFN13Q68D06 897 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZFP1Q6P2D0 407 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 DRICH1Q6PGQ1 229 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 CCDC137Q6PK04 289 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 XKRXQ6PP77 449 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 NLRC3Q7RTR2 1065 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 APTXQ7Z2E3 356 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 HEATR3Q7Z4Q2 680 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ARPINQ7Z6K5 226 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 DHDDSQ86SQ9 333 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAM83AQ86UY5 434 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 COLGALT2Q8IYK4 626 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ADGRF2Q8IZF7 708 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAM9CQ8IZT9 166 aa4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 NGDNQ8NEJ9 315 aaKnown RBP4.93□□□□□ -1.62
HMGB1P19-201ENST00000517578 ST13P5Q8NFI4 369 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms