RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 MGME1Q9BQP7 344 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 BTBD1Q9H0C5 482 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 CXorf36Q9H7Y0 433 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 DKK4Q9UBT3 224 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 MRPS28Q9Y2Q9 187 aaKnown RBP-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 HEMK1Q9Y5R4 338 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 NAV2Q8IVL1 2488 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 DISP3Q9P2K9 1392 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 A0A0U1RQJ8 604 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 A0A1W2PPR1 153 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 M0R3H8 397 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 LDB2O43679 373 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 TMPRSS11DO60235 418 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 KDM1AO60341 852 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 TNFRSF6BO95407 300 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 RECKO95980 971 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 INHBAP08476 426 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 FAM153BP0C7A2 387 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 ARL14EPLP0DKL9 152 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 SLC5A1P13866 664 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 PAX1P15863 534 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 HDCP19113 662 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 GNLYP22749 145 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 ACVR2AP27037 513 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 THPOP40225 353 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 HOXA1P49639 335 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 BRWD1-AS2P59051 145 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 MYO1EQ12965 1108 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 RAB39AQ14964 217 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 DDR2Q16832 855 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 UGT8Q16880 541 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 MPEG1Q2M385 716 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 C15orf32Q32M92 178 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 XKR9Q5GH70 373 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 TBC1D9BQ66K14 1250 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 LAYNQ6UX15 382 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 USP37Q86T82 979 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 SATL1Q86VE3 508 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZNF280BQ86YH2 543 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZNF654Q8IZM8 581 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 RNF152Q8N8N0 203 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 FAM46DQ8NEK8 389 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 LNX1Q8TBB1 728 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 BRIX1Q8TDN6 353 aaKnown RBP-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 CHTF18Q8WVB6 975 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 TMX3Q96JJ7 454 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 IPO9Q96P70 1041 aaKnown RBP-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZNF385AQ96PM9 386 aaKnown RBP-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 RPP25Q9BUL9 199 aaKnown RBP-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 TRIM6Q9C030 488 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 CHST8Q9H2A9 424 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 BRD9Q9H8M2 597 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 CTSZQ9UBR2 303 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 HESX1Q9UBX0 185 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 KCNG1Q9UIX4 513 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZBTB21Q9ULJ3 1066 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 PYGO1Q9Y3Y4 419 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 DAAM1Q9Y4D1 1078 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 LOXL2Q9Y4K0 774 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 RAI2Q9Y5P3 530 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 IVNS1ABPQ9Y6Y0 642 aa-0.52□□□□□ -2.49
RNU6-542P-201ENST00000516405 IGHV4-28A0A0C4DH34 117 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 FAM171A2A8MVW0 826 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 FOXO6A8MYZ6 492 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 SMIM1B2RUZ4 78 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 M0QYG6 137 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 PSMD9O00233 223 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 CAPN9O14815 690 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 HDAC3O15379 428 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZEB2O60315 1214 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 IGKV1D-16P01601 117 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 ATXN1LP0C7T5 689 aaKnown RBP-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 ATP6V1B1P15313 513 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 NAGAP17050 411 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 C21orf33P30042 268 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 PEX5P50542 639 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 JAK3P52333 1124 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 WDR5P61964 334 aaKnown RBP-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 MALLQ13021 153 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 GRAPQ13588 217 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 RAPSNQ13702 412 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 GBX1Q14549 363 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZNF460Q14592 562 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 LONRF3Q496Y0 759 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 EFHC1Q5JVL4 640 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 CACHD1Q5VU97 1274 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZNF790Q6PG37 636 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 KDELC2Q7Z4H8 507 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 TBC1D1Q86TI0 1168 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 DDX42Q86XP3 938 aaKnown RBP eCLIP-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 UEVLDQ8IX04 471 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 RHOT1Q8IXI2 618 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 MB21D2Q8IYB1 491 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 LYPD1Q8N2G4 141 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 KDM1BQ8NB78 822 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 OR2T6Q8NHC8 308 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 DPF2Q92785 391 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 TTC14Q96N46 770 aa-0.53□□□□□ -2.49
RNU6-542P-201ENST00000516405 ADI1Q9BV57 179 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms