RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	ATXN7L3B	Q96GX2	97 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	TMX3	Q96JJ7	454 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	APOLD1	Q96LR9	279 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	SLC46A1	Q96NT5	459 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	FAM129B	Q96TA1	746 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	MYOC	Q99972	504 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	TNMD	Q9H2S6	317 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	CAAP1	Q9H8G2	361 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	RTN4	Q9NQC3	1192 aa	Known RBP	10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	OLA1	Q9NTK5	396 aa	Known RBP	10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	ARHGAP20	Q9P2F6	1191 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	SFMBT1	Q9UHJ3	866 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	DACH1	Q9UI36	760 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	INTS6	Q9UL03	887 aa	Known RBP	10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	USP9X	Q93008	2570 aa	Predicted RBP	10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	LRRK2	Q5S007	2527 aa		10.89	□□□□□ -0.67
CLDND1-231	ENST00000515620	MYO9A	B2RTY4	2548 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	GOLGA6L7	A0A1B0GV03	622 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	TARSL2	A2RTX5	802 aa	Known RBP	10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	VPS37C	A5D8V6	355 aa	Predicted RBP	10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	RTN2	O75298	545 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	ZBED1	O96006	694 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	CENPB	P07199	599 aa	Predicted RBP	10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	GP1BA	P07359	652 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	ALPPL2	P10696	532 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	MZF1	P28698	734 aa	Predicted RBP	10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	SLC6A4	P31645	630 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	DRD3	P35462	400 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	CTSO	P43234	321 aa	Predicted RBP	10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	TKTL1	P51854	596 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	METAP1	P53582	386 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	ARID5B	Q14865	1188 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	LINC00303	Q3SY05	128 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	KMT5B	Q4FZB7	885 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	ZNF394	Q53GI3	561 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	RAB41	Q5JT25	222 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	PIK3R6	Q5UE93	754 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	MMS22L	Q6ZRQ5	1243 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	SV2A	Q7L0J3	742 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	BHLHA9	Q7RTU4	235 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	ZNF557	Q8N988	423 aa	Predicted RBP	10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	IFI44	Q8TCB0	444 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	RNF139	Q8WU17	664 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	KLHDC7B	Q96G42	594 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	LMLN	Q96KR4	655 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	HEXIM2	Q96MH2	286 aa	Known RBP	10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	CCNL2	Q96S94	520 aa	Predicted RBP	10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	ARHGAP9	Q9BRR9	750 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	ULBP1	Q9BZM6	244 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	IMPG2	Q9BZV3	1241 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	LRRC27	Q9C0I9	530 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	APOBEC3G	Q9HC16	384 aa	Known RBP	10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	STARD5	Q9NSY2	213 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	CGN	Q9P2M7	1197 aa	Known RBP	10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	TJP2	Q9UDY2	1190 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	ERVW-1	Q9UQF0	538 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	DMTF1	Q9Y222	760 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	CEP83	Q9Y592	693 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	FLNC	Q14315	2725 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	TLN1	Q9Y490	2541 aa	Known RBP	10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	BOD1L1	Q8NFC6	3051 aa		10.88	□□□□□ -0.67
CLDND1-231	ENST00000515620	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	LY6G6E	A0A0G2JKS1	128 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	CDRT15L2	A8MXV6	281 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	SUV39H1	O43463	412 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	PIAS2	O75928	621 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	GIMD1	P0DJR0	217 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	GP1BB	P13224	206 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	TGM2	P21980	687 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	NUDT1	P36639	197 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	CDH18	Q13634	790 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	KNOP1	Q1ED39	458 aa	Known RBP	10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	ARL13B	Q3SXY8	428 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	SETMAR	Q53H47	684 aa	Predicted RBP	10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	FAM133B	Q5BKY9	247 aa	Known RBP	10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	PITRM1	Q5JRX3	1037 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	MPP7	Q5T2T1	576 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	RNF219	Q5W0B1	726 aa	Predicted RBP	10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	CARNMT1	Q8N4J0	409 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	KDM1B	Q8NB78	822 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	HJURP	Q8NCD3	748 aa	Predicted RBP	10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	FIBIN	Q8TAL6	211 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	EXTL1	Q92935	676 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	PRICKLE1	Q96MT3	831 aa	Predicted RBP	10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	DNAI2	Q9GZS0	605 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	NIF3L1	Q9GZT8	377 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	CYP3A43	Q9HB55	503 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	KBTBD4	Q9NVX7	518 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	NLGN3	Q9NZ94	848 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	ENTPD2	Q9Y5L3	495 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620		U3KQA8	63 aa		10.87	□□□□□ -0.67
CLDND1-231	ENST00000515620	ITIH6	Q6UXX5	1313 aa		10.86	□□□□□ -0.67
CLDND1-231	ENST00000515620	PRAMEF26	H0Y7S4	382 aa		10.86	□□□□□ -0.67
CLDND1-231	ENST00000515620	TULP2	O00295	520 aa		10.86	□□□□□ -0.67
CLDND1-231	ENST00000515620	PLRG1	O43660	514 aa	Known RBP	10.86	□□□□□ -0.67
CLDND1-231	ENST00000515620	LZTS3	O60299	673 aa	Predicted RBP	10.86	□□□□□ -0.67
CLDND1-231	ENST00000515620	AFP	P02771	609 aa	Known RBP	10.86	□□□□□ -0.67
CLDND1-231	ENST00000515620	SRPRA	P08240	638 aa	Known RBP	10.86	□□□□□ -0.67
CLDND1-231	ENST00000515620	FAM87A	P0C7U9	286 aa		10.86	□□□□□ -0.67

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