RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 TLR4O00206 839 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 WNT9AO14904 365 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 CETN3O15182 167 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 C1QL1O75973 258 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 MOCS3O95396 460 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 LTFP02788 710 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 GOT1P17174 413 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 C5AR1P21730 350 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 RGS7P49802 495 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 RPS24P62847 133 aaKnown RBP16.32■□□□□ 0.2
LMNA-223ENST00000515459 ILKQ13418 452 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 CBWD6Q4V339 395 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 DCAF17Q5H9S7 520 aaPredicted RBP16.32■□□□□ 0.2
LMNA-223ENST00000515459 PITRM1Q5JRX3 1037 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 CBWD3Q5JTY5 395 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 CBWD5Q5RIA9 395 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 ITIH6Q6UXX5 1313 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 OXR1Q8N573 874 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 OR14C36Q8NHC7 312 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 SNIP1Q8TAD8 396 aaKnown RBP16.32■□□□□ 0.2
LMNA-223ENST00000515459 SLC35F5Q8WV83 523 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 SNX21Q969T3 373 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 ERVMER34-1Q9H9K5 563 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 CEP83Q9Y592 693 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 BPTFQ12830 3046 aa16.32■□□□□ 0.2
LMNA-223ENST00000515459 SETXQ7Z333 2677 aaKnown RBP16.32■□□□□ 0.2
LMNA-223ENST00000515459 PIK3R2O00459 728 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 GABBR2O75899 941 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 ADH1BP00325 375 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 PSMD8P48556 350 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 NDUFA8P51970 172 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 ADPRHP54922 357 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 NXPH1P58417 271 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 BNIP3Q12983 259 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 PKP1Q13835 747 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 FSCBQ5H9T9 825 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 MS4A13Q5J8X5 152 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 SFMBT2Q5VUG0 894 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 RNF219Q5W0B1 726 aaPredicted RBP16.31■□□□□ 0.2
LMNA-223ENST00000515459 PMF1Q6P1K2 205 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 LCLAT1Q6UWP7 414 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 AADATQ8N5Z0 425 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 FGF11Q92914 225 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 SPATA32Q96LK8 384 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 FAM129BQ96TA1 746 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 RAI2Q9Y5P3 530 aa16.31■□□□□ 0.2
LMNA-223ENST00000515459 TBC1D3DA0A087WVF3 549 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 TBC1D3IA0A087WXS9 549 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 TBC1D3EA0A087X179 549 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 TBC1D3KA0A087X1G2 549 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 FAM237AA0A1B0GTK4 181 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 TBC1D3FA6NER0 549 aaPredicted RBP16.3■□□□□ 0.2
LMNA-223ENST00000515459 TBC1D3LB9A6J9 549 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 LUC7L3O95232 432 aaKnown RBP16.3■□□□□ 0.2
LMNA-223ENST00000515459 PAEPP09466 180 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 TBC1D3HP0C7X1 549 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 CKMT2P17540 419 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 TBXAS1P24557 533 aaPredicted RBP16.3■□□□□ 0.2
LMNA-223ENST00000515459 CTSOP43234 321 aaPredicted RBP16.3■□□□□ 0.2
LMNA-223ENST00000515459 RXRGP48443 463 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 ECT2LQ008S8 904 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 TBC1D3GQ6DHY5 549 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 TBC1D3CQ6IPX1 549 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 NAPEPLDQ6IQ20 393 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 KRBA2Q6ZNG9 492 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 MMS22LQ6ZRQ5 1243 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 TBC1D3Q8IZP1 549 aaPredicted RBP16.3■□□□□ 0.2
LMNA-223ENST00000515459 CACTIN-AS1Q8N1I8 211 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 CFAP52Q8N1V2 620 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 STK40Q8N2I9 435 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 UBR7Q8N806 425 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 MFSD2AQ8NA29 543 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 CLEC4CQ8WTT0 213 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 TFAP2BQ92481 460 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 PTPRN2Q92932 1015 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 MYEOVQ96EZ4 313 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 FCRL2Q96LA5 508 aaPredicted RBP16.3■□□□□ 0.2
LMNA-223ENST00000515459 SERPINB11Q96P15 392 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 NUCKS1Q9H1E3 243 aaKnown RBP16.3■□□□□ 0.2
LMNA-223ENST00000515459 SLCO3A1Q9UIG8 710 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 TLR6Q9Y2C9 796 aa16.3■□□□□ 0.2
LMNA-223ENST00000515459 TEX51A0A1B0GUA7 166 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 CAPN9O14815 690 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 LATO43561 262 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 MAGEC1O60732 1142 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 FBXO21O94952 628 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 IL1BP01584 269 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 ACTN2P35609 894 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 LRMPQ12912 555 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 NNTQ13423 1086 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 ELAVL3Q14576 367 aaKnown RBP16.29■□□□□ 0.2
LMNA-223ENST00000515459 CNGA2Q16280 664 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 DCAF6Q58WW2 860 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 TMEM270Q6UE05 265 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 GPR155Q7Z3F1 870 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 PRPF39Q86UA1 669 aaKnown RBP16.29■□□□□ 0.2
LMNA-223ENST00000515459 SMYD4Q8IYR2 804 aaPredicted RBP16.29■□□□□ 0.2
LMNA-223ENST00000515459 COL26A1Q96A83 441 aa16.29■□□□□ 0.2
LMNA-223ENST00000515459 RPL10LQ96L21 214 aaKnown RBP16.29■□□□□ 0.2
LMNA-223ENST00000515459 CLCA2Q9UQC9 943 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms