RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ZBTB49Q6ZSB9 765 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 CAND1Q86VP6 1230 aaKnown RBP13.1□□□□□ -0.31
SMAD1-215ENST00000515385 MCF2L2Q86YR7 1114 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 ZNF786Q8N393 782 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 SLC15A4Q8N697 577 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 KCTD6Q8NC69 237 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 RNF169Q8NCN4 708 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 TMEM161BQ8NDZ6 487 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 GMCL1P1Q8NEA9 526 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 CMASQ8NFW8 434 aaPredicted RBP13.1□□□□□ -0.31
SMAD1-215ENST00000515385 RCN3Q96D15 328 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 VRTNQ9H8Y1 702 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 MAGEE1Q9HCI5 957 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 MRGBPQ9NV56 204 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 KLHL3Q9UH77 587 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 PACSIN3Q9UKS6 424 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 PRELID1Q9Y255 219 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 DAGLAQ9Y4D2 1042 aa13.1□□□□□ -0.31
SMAD1-215ENST00000515385 BCL10O95999 233 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ERBB2P04626 1255 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 C7P10643 843 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 MYCLP1P12525 358 aaPredicted RBP13.09□□□□□ -0.31
SMAD1-215ENST00000515385 P4HA1P13674 534 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ENO3P13929 434 aaPredicted RBP13.09□□□□□ -0.31
SMAD1-215ENST00000515385 POLR2EP19388 210 aaKnown RBP13.09□□□□□ -0.31
SMAD1-215ENST00000515385 TKTP29401 623 aaKnown RBP13.09□□□□□ -0.31
SMAD1-215ENST00000515385 TM4SF1P30408 202 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 MAGEA3P43357 314 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 PKNOX1P55347 436 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ATP6V0D1P61421 351 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 NFATC3Q12968 1075 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 BNIP3Q12983 259 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ITPK1Q13572 414 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 TRIM25Q14258 630 aaKnown RBP13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ZNF846Q147U1 533 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 RAB39AQ14964 217 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 KCNJ8Q15842 424 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 SLC9B1Q4ZJI4 515 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 FGD3Q5JSP0 725 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 AGAP7PQ5VUJ5 663 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 C11orf74Q86VG3 221 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ZNF606Q8WXB4 792 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 CDKL2Q92772 493 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ATP6V1E2Q96A05 226 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ACDQ96AP0 544 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 PBXIP1Q96AQ6 731 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 IMPG2Q9BZV3 1241 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 CD320Q9NPF0 282 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 SBF2Q86WG5 1849 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 SLX4Q8IY92 1834 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ZNF839A8K0R7 811 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 KPNA7A9QM74 516 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 FOXD2O60548 495 aaPredicted RBP13.09□□□□□ -0.31
SMAD1-215ENST00000515385 CLPXO76031 633 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 C4BPAP04003 597 aaKnown RBP13.09□□□□□ -0.31
SMAD1-215ENST00000515385 BMP2P12643 396 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ENDOUP21128 410 aaKnown RBP13.09□□□□□ -0.31
SMAD1-215ENST00000515385 POLR2BP30876 1174 aaKnown RBP13.09□□□□□ -0.31
SMAD1-215ENST00000515385 HSPA2P54652 639 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 MFSD14BQ5SR56 506 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 TMEM214Q6NUQ4 689 aaKnown RBP13.09□□□□□ -0.31
SMAD1-215ENST00000515385 GADL1Q6ZQY3 521 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 LINC00299Q6ZSB3 139 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ZNF280CQ8ND82 737 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 LRTOMTQ8WZ04 291 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ZNF516Q92618 1163 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 ZNF347Q96SE7 839 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 SDCBP2Q9H190 292 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 VPS33BQ9H267 617 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 GPRC5CQ9NQ84 441 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 DUS2Q9NX74 493 aaKnown RBP13.09□□□□□ -0.31
SMAD1-215ENST00000515385 MOCS1Q9NZB8 636 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 DAPK2Q9UIK4 370 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 IFT52Q9Y366 437 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 CPQQ9Y646 472 aa13.09□□□□□ -0.31
SMAD1-215ENST00000515385 SLCO1B7G3V0H7 640 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 DYNC1LI2O43237 492 aaPredicted RBP13.08□□□□□ -0.32
SMAD1-215ENST00000515385 PAPSS1O43252 624 aaPredicted RBP13.08□□□□□ -0.32
SMAD1-215ENST00000515385 VAPBO95292 243 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 MAP4P27816 1152 aaKnown RBP13.08□□□□□ -0.32
SMAD1-215ENST00000515385 CDH5P33151 784 aaPredicted RBP13.08□□□□□ -0.32
SMAD1-215ENST00000515385 QARSP47897 775 aaKnown RBP13.08□□□□□ -0.32
SMAD1-215ENST00000515385 ZNF132P52740 706 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 DMPKQ09013 629 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 IKQ13123 557 aaPredicted RBP13.08□□□□□ -0.32
SMAD1-215ENST00000515385 DMP1Q13316 513 aaPredicted RBP13.08□□□□□ -0.32
SMAD1-215ENST00000515385 PMS2P3Q13401 168 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 TUBA3CQ13748 450 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 PTK2BQ14289 1009 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 INTS11Q5TA45 600 aaKnown RBP13.08□□□□□ -0.32
SMAD1-215ENST00000515385 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 SLC30A10Q6XR72 485 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 CAMK1DQ8IU85 385 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 UNC5BQ8IZJ1 945 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 TTC30BQ8N4P2 665 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 TDRD5Q8NAT2 981 aaKnown RBP13.08□□□□□ -0.32
SMAD1-215ENST00000515385 TANKQ92844 425 aa13.08□□□□□ -0.32
SMAD1-215ENST00000515385 USP13Q92995 863 aaPredicted RBP13.08□□□□□ -0.32
SMAD1-215ENST00000515385 ELMO3Q96BJ8 720 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms