RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 NEU3Q9UQ49 428 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 PAXBP1Q9Y5B6 917 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 PCDHGA5Q9Y5G8 931 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 RAD54BQ9Y620 910 aa10.02□□□□□ -0.81
RNF4-221ENST00000513643 MUC22E2RYF6 1773 aaPredicted RBP10.01□□□□□ -0.81
RNF4-221ENST00000513643 SYNJ2BP-COX16A0A087WUM0 186 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 IGHV1OR15-9A0A0B4J2B8 117 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 FAM170AA1A519 330 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 GOLGA6L19H0YKK7 550 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 ZNF217O75362 1048 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 CLDN11O75508 207 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 CNTN5O94779 1100 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 ASLP04424 464 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 GYPCP04921 128 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 ATP5BP06576 529 aaKnown RBP10.01□□□□□ -0.81
RNF4-221ENST00000513643 SRPRAP08240 638 aaKnown RBP10.01□□□□□ -0.81
RNF4-221ENST00000513643 TNFAIP3P21580 790 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 RRM1P23921 792 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 CSKP41240 450 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 CTSOP43234 321 aaPredicted RBP10.01□□□□□ -0.81
RNF4-221ENST00000513643 ZNF143P52747 638 aaPredicted RBP10.01□□□□□ -0.81
RNF4-221ENST00000513643 CDH4P55283 916 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 RPL7AP62424 266 aaKnown RBP10.01□□□□□ -0.81
RNF4-221ENST00000513643 ZBED6P86452 979 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 OGDHQ02218 1023 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 SCAPQ12770 1279 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 MAMLD1Q13495 774 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 ASIC2Q16515 512 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 CSRP2Q16527 193 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 C15orf59Q2T9L4 293 aaPredicted RBP10.01□□□□□ -0.81
RNF4-221ENST00000513643 ALFQ53S48 1182 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 RABGAP1LQ5R372 815 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 PEAR1Q5VY43 1037 aaPredicted RBP10.01□□□□□ -0.81
RNF4-221ENST00000513643 PHLDB2Q86SQ0 1253 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 DRC7Q8IY82 874 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 CARNMT1Q8N4J0 409 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 ARFGAP1Q8N6T3 406 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 CYB5D2Q8WUJ1 264 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 HMGB4Q8WW32 186 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 RLN3Q8WXF3 142 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 RNF34Q969K3 372 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 NTAN1Q96AB6 310 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 FEM1AQ9BSK4 669 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 XPO4Q9C0E2 1151 aaKnown RBP10.01□□□□□ -0.81
RNF4-221ENST00000513643 RETREG1Q9H6L5 497 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 PRSS16Q9NQE7 514 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 COX16Q9P0S2 106 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 PPARGC1AQ9UBK2 798 aaKnown RBP10.01□□□□□ -0.81
RNF4-221ENST00000513643 VANGL2Q9ULK5 521 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 PLA2G4CQ9UP65 541 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 SNX10Q9Y5X0 201 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 PLXND1Q9Y4D7 1925 aa10.01□□□□□ -0.81
RNF4-221ENST00000513643 CNOT1A5YKK6 2376 aaKnown RBP10.01□□□□□ -0.81
RNF4-221ENST00000513643 BCLAF3A2AJT9 711 aaKnown RBP10□□□□□ -0.81
RNF4-221ENST00000513643 TYW5A2RUC4 315 aaKnown RBP10□□□□□ -0.81
RNF4-221ENST00000513643 TMEM191CA6NGB0 347 aa10□□□□□ -0.81
RNF4-221ENST00000513643 E9PAM4 449 aa10□□□□□ -0.81
RNF4-221ENST00000513643 H0Y626 953 aa10□□□□□ -0.81
RNF4-221ENST00000513643 RHOBTB1O94844 696 aa10□□□□□ -0.81
RNF4-221ENST00000513643 ZNF806P0C7X5 589 aa10□□□□□ -0.81
RNF4-221ENST00000513643 SKILP12757 684 aa10□□□□□ -0.81
RNF4-221ENST00000513643 POLR2EP19388 210 aaKnown RBP10□□□□□ -0.81
RNF4-221ENST00000513643 MZF1P28698 734 aaPredicted RBP10□□□□□ -0.81
RNF4-221ENST00000513643 SDC4P31431 198 aa10□□□□□ -0.81
RNF4-221ENST00000513643 GGCXP38435 758 aa10□□□□□ -0.81
RNF4-221ENST00000513643 OXCT1P55809 520 aa10□□□□□ -0.81
RNF4-221ENST00000513643 ATP11AP98196 1134 aa10□□□□□ -0.81
RNF4-221ENST00000513643 ECT2LQ008S8 904 aa10□□□□□ -0.81
RNF4-221ENST00000513643 KLHL30Q0D2K2 578 aa10□□□□□ -0.81
RNF4-221ENST00000513643 CDH18Q13634 790 aa10□□□□□ -0.81
RNF4-221ENST00000513643 BYSLQ13895 437 aaKnown RBP10□□□□□ -0.81
RNF4-221ENST00000513643 LPAL2Q16609 132 aa10□□□□□ -0.81
RNF4-221ENST00000513643 ASTE1Q2TB18 679 aaPredicted RBP10□□□□□ -0.81
RNF4-221ENST00000513643 HNRNPA1L2Q32P51 320 aaKnown RBP10□□□□□ -0.81
RNF4-221ENST00000513643 C9orf64Q5T6V5 341 aa10□□□□□ -0.81
RNF4-221ENST00000513643 PRR23BQ6ZRT6 265 aa10□□□□□ -0.81
RNF4-221ENST00000513643 CEP68Q76N32 757 aa10□□□□□ -0.81
RNF4-221ENST00000513643 SND1Q7KZF4 910 aaKnown RBP eCLIP10□□□□□ -0.81
RNF4-221ENST00000513643 SETD3Q86TU7 594 aaPredicted RBP10□□□□□ -0.81
RNF4-221ENST00000513643 NLRP14Q86W24 1093 aa10□□□□□ -0.81
RNF4-221ENST00000513643 CIR1Q86X95 450 aaPredicted RBP10□□□□□ -0.81
RNF4-221ENST00000513643 FAM131BQ86XD5 332 aa10□□□□□ -0.81
RNF4-221ENST00000513643 TMPRSS6Q8IU80 811 aa10□□□□□ -0.81
RNF4-221ENST00000513643 OR2T3Q8NH03 318 aa10□□□□□ -0.81
RNF4-221ENST00000513643 FNIP1Q8TF40 1166 aa10□□□□□ -0.81
RNF4-221ENST00000513643 FRS2Q8WU20 508 aa10□□□□□ -0.81
RNF4-221ENST00000513643 FAM131CQ96AQ9 280 aa10□□□□□ -0.81
RNF4-221ENST00000513643 ZNF419Q96HQ0 510 aaPredicted RBP10□□□□□ -0.81
RNF4-221ENST00000513643 RPRD1AQ96P16 312 aaPredicted RBP10□□□□□ -0.81
RNF4-221ENST00000513643 PSMB7Q99436 277 aa10□□□□□ -0.81
RNF4-221ENST00000513643 CNPY3Q9BT09 278 aa10□□□□□ -0.81
RNF4-221ENST00000513643 MAGEB5Q9BZ81 275 aa10□□□□□ -0.81
RNF4-221ENST00000513643 SLC6A17Q9H1V8 727 aa10□□□□□ -0.81
RNF4-221ENST00000513643 TSPY26PQ9H489 355 aa10□□□□□ -0.81
RNF4-221ENST00000513643 FBRSQ9HAH7 460 aa10□□□□□ -0.81
RNF4-221ENST00000513643 CD93Q9NPY3 652 aa10□□□□□ -0.81
RNF4-221ENST00000513643 SEMA4GQ9NTN9 838 aa10□□□□□ -0.81
RNF4-221ENST00000513643 WSB2Q9NYS7 404 aaPredicted RBP10□□□□□ -0.81
RNF4-221ENST00000513643 SUN2Q9UH99 717 aa10□□□□□ -0.81
RNF4-221ENST00000513643 SLCO3A1Q9UIG8 710 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms