RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 MAN2B2Q9Y2E5 1009 aa4.15□□□□□ -1.75
TOPBP1-208ENST00000511439 SNX14Q9Y5W7 946 aa4.15□□□□□ -1.75
TOPBP1-208ENST00000511439 WNT6Q9Y6F9 365 aa4.15□□□□□ -1.75
TOPBP1-208ENST00000511439 ASH1LQ9NR48 2969 aaKnown RBP4.15□□□□□ -1.75
TOPBP1-208ENST00000511439 COL4A6Q14031 1691 aa4.15□□□□□ -1.75
TOPBP1-208ENST00000511439 IBTKQ9P2D0 1353 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 PTPRZ1P23471 2315 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 A1L4Q6 167 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 TNPO2O14787 897 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 BBOX1O75936 387 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 IL6RP08887 468 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 EEF1GP26641 437 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 PRKAR1BP31321 381 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 LIPAP38571 399 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 TNNT2P45379 298 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 ZNF81P51508 661 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 COPAP53621 1224 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 ITGA8P53708 1063 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 MAPK10P53779 464 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 BMPR2Q13873 1038 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 KCNAB1Q14722 419 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 RAB30Q15771 203 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 LY6KQ17RY6 165 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 MPEG1Q2M385 716 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 SUPT20HL1Q3ZLR7 823 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 FAM153CQ494X1 144 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 TREML2Q5T2D2 321 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 MANEALQ5VSG8 457 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 MZT2AQ6P582 158 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 KIAA0408Q6ZU52 694 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 C1QL2Q7Z5L3 287 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 TTC5Q8N0Z6 440 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 ADSSL1Q8N142 457 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 TXLNBQ8N3L3 684 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 CYP2W1Q8TAV3 490 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 ATRIPQ8WXE1 791 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 SOCS4Q8WXH5 440 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 GLG1Q92896 1179 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 C17orf80Q9BSJ5 609 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 MAGEB5Q9BZ81 275 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 ARFGAP3Q9NP61 516 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 SH2B3Q9UQQ2 575 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 PCDHGB2Q9Y5G2 931 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 A0A0G2JMZ2 1700 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 FLNBO75369 2602 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 MYO15AQ9UKN7 3530 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 ABCC4O15439 1325 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 UBR2Q8IWV8 1755 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 ZNF292O60281 2723 aa4.14□□□□□ -1.75
TOPBP1-208ENST00000511439 CGB1A6NKQ9 187 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 BTBD19C9JJ37 291 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 PLA2G6O60733 806 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 NXPH3O95157 252 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 NDST3O95803 873 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 ONECUT2O95948 504 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 PRKCGP05129 697 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 ZFXP17010 805 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 GABRB3P28472 473 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 PCSK6P29122 969 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 EPHA3P29320 983 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 UQCRC1P31930 480 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 PPM1AP35813 382 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 CLCN2P51788 898 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 PROK1P58294 105 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 TIAL1Q01085 375 aaKnown RBP eCLIP4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 STK3Q13188 491 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 C10orf62Q5T681 223 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 TSTD2Q5T7W7 516 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 SLC9A4Q6AI14 798 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 C1orf228Q6PIY5 440 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 USP17L6PQ6QN14 398 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 ZNF566Q969W8 418 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 RSPRY1Q96DX4 576 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 ZDHHC12Q96GR4 267 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 ZNF668Q96K58 619 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 ZBTB45Q96K62 511 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 FAM227BQ96M60 508 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 FSD1Q9BTV5 496 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 SELENOOQ9BVL4 669 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 DEFB129Q9H1M3 183 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 VPS51Q9UID3 782 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 HPSEQ9Y251 543 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 CEP83Q9Y592 693 aa4.13□□□□□ -1.75
TOPBP1-208ENST00000511439 USP24Q9UPU5 2620 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 MAP1BP46821 2468 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 PLXNA3P51805 1871 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 HNRNPDLO14979 420 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 URI1O94763 535 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 VNN1O95497 513 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 FESP07332 822 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 ELFN1P0C7U0 828 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 NR2F6P10588 404 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 HGFP14210 728 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 ATICP31939 592 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 NBL1P41271 181 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 ALDH9A1P49189 494 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 GATMP50440 423 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 PGDP52209 483 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 SLC10A2Q12908 348 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 PLAC9Q5JTB6 97 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms