RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 OSBPL2Q9H1P3 480 aa12.12□□□□□ -0.47
HMGXB3-203ENST00000510472 ARHGAP20Q9P2F6 1191 aa12.12□□□□□ -0.47
HMGXB3-203ENST00000510472 ADAMTS1Q9UHI8 967 aa12.12□□□□□ -0.47
HMGXB3-203ENST00000510472 VANGL2Q9ULK5 521 aa12.12□□□□□ -0.47
HMGXB3-203ENST00000510472 RAD54BQ9Y620 910 aa12.12□□□□□ -0.47
HMGXB3-203ENST00000510472 FAM186AA6NE01 2351 aa12.12□□□□□ -0.47
HMGXB3-203ENST00000510472 TYW5A2RUC4 315 aaKnown RBP12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 TMEM191CA6NGB0 347 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 TMCO5BA8MYB1 307 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 H0Y626 953 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 DCLK1O15075 740 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 CLDN11O75508 207 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 CNTN5O94779 1100 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 ATP5BP06576 529 aaKnown RBP12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 CSKP41240 450 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 CDH4P55283 916 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 CAMK2GQ13555 558 aaPredicted RBP12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 CDH18Q13634 790 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 ASTE1Q2TB18 679 aaPredicted RBP12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 PLEKHG6Q3KR16 790 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 PLK5Q496M5 336 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 USP39Q53GS9 565 aaKnown RBP12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 METTL3Q86U44 580 aaKnown RBP12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 KBTBD6Q86V97 674 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 GAS2L3Q86XJ1 694 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 ARFGAP1Q8N6T3 406 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 FAM172AQ8WUF8 416 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 CYB5D2Q8WUJ1 264 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 HMGB4Q8WW32 186 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 RUBCNQ92622 972 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 NTAN1Q96AB6 310 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 RPRD1AQ96P16 312 aaPredicted RBP12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 FEM1AQ9BSK4 669 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 MAGEB5Q9BZ81 275 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 TPSD1Q9BZJ3 242 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 MKRN2Q9H000 416 aaKnown RBP12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 DUSP15Q9H1R2 295 aaPredicted RBP12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 PARVAQ9NVD7 372 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 PPARGC1AQ9UBK2 798 aaKnown RBP12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 PLA2G4CQ9UP65 541 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 NEU3Q9UQ49 428 aa12.11□□□□□ -0.47
HMGXB3-203ENST00000510472 GVINP1Q7Z2Y8 2422 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 A0A087X0T9 212 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 E9PAM4 449 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 CCP110O43303 1012 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 ASLP04424 464 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 FAM228BP0C875 321 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 POLR2EP19388 210 aaKnown RBP12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 NDUFV2P19404 249 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 MZF1P28698 734 aaPredicted RBP12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 CTSOP43234 321 aaPredicted RBP12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 COPAP53621 1224 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 OXCT1P55809 520 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 ZNF252P-AS1Q0IIN9 211 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 SCAPQ12770 1279 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 TBX2Q13207 712 aaPredicted RBP12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 ZNF177Q13360 481 aaPredicted RBP12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 TRIM14Q14142 442 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 CDO1Q16878 200 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 LAIR1Q6GTX8 287 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 DCLK2Q8N568 766 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 FAM160A2Q8N612 972 aaPredicted RBP12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 CCDC185Q8N715 623 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 FRMD1Q8N878 549 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 OR8K1Q8NGG5 319 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 FNIP1Q8TF40 1166 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 RLN3Q8WXF3 142 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 LOXL4Q96JB6 756 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 MCEEQ96PE7 176 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 RBSNQ9H1K0 784 aa12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 MBD1Q9UIS9 605 aaPredicted RBP12.1□□□□□ -0.47
HMGXB3-203ENST00000510472 FAM72CH0Y354 149 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 RETP07949 1114 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 SRPRAP08240 638 aaKnown RBP12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 MYBL1P10243 752 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 HLA-EP13747 358 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 BCKDHBP21953 392 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 ECT2LQ008S8 904 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 FAM72AQ5TYM5 149 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 FAM72DQ6L9T8 149 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 DCUN1D2Q6PH85 259 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 SERPINA13PQ6UXR4 307 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 LRRC31Q6UY01 552 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 SETD3Q86TU7 594 aaPredicted RBP12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 NLRP14Q86W24 1093 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 FAM72BQ86X60 149 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 CCDC117Q8IWD4 279 aaPredicted RBP12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 TRIM7Q9C029 511 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 SLC6A17Q9H1V8 727 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 RETREG1Q9H6L5 497 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 PRSS16Q9NQE7 514 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 ITM2CQ9NQX7 267 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 MPP6Q9NZW5 540 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 CNOT8Q9UFF9 292 aaKnown RBP12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 OR12D3Q9UGF7 316 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 SLCO3A1Q9UIG8 710 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 ERVW-1Q9UQF0 538 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms