RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 TNFRSF13BO14836 293 aaPredicted RBP5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 NEURL1O76050 574 aa5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 FAM90A15PP0C7V4 464 aa5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 FAM90A14PP0C7W9 464 aa5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 CYP3A7P24462 503 aa5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 SERPINB3P29508 390 aa5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 SF3A3Q12874 501 aaKnown RBP eCLIP5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 ERV3-1Q14264 604 aa5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 UBAP2Q5T6F2 1119 aaKnown RBP5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 CYB5R4Q7L1T6 521 aa5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 ADPRHL1Q8NDY3 354 aa5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 TMEM41AQ96HV5 264 aa5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 CLMNQ96JQ2 1002 aa5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 MAP6D1Q9H9H5 199 aa5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 OBP2BQ9NPH6 170 aa5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 COPG1Q9Y678 874 aaKnown RBP5.16□□□□□ -1.58
UBE2D3-225ENST00000508476 TBC1D3DA0A087WVF3 549 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 TBC1D3IA0A087WXS9 549 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 TBC1D3EA0A087X179 549 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 TBC1D3KA0A087X1G2 549 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 TBC1D3BA6NDS4 549 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 TBC1D3FA6NER0 549 aaPredicted RBP5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 AGAP5A6NIR3 686 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 C3orf70A6NLC5 250 aaPredicted RBP5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 LGALS16A8MUM7 142 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 TBC1D3LB9A6J9 549 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 TBC1D3HP0C7X1 549 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 TBXAS1P24557 533 aaPredicted RBP5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 TECP42680 631 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 RBM6P78332 1123 aaKnown RBP5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 SPARCL1Q14515 664 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 ENTPD8Q5MY95 495 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 C10orf76Q5T2E6 689 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 TBC1D3GQ6DHY5 549 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 TBC1D3CQ6IPX1 549 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 KIAA1324Q6UXG2 1013 aaKnown RBP5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 GATAD2AQ86YP4 633 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 TBC1D3Q8IZP1 549 aaPredicted RBP5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 CENPIQ92674 756 aaPredicted RBP5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 ZNF419Q96HQ0 510 aaPredicted RBP5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 ELAC2Q9BQ52 826 aaKnown RBP5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 MAGEH1Q9H213 219 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 ZNF304Q9HCX3 659 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 SEPSECSQ9HD40 501 aaKnown RBP5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 NLRC4Q9NPP4 1024 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 CNTN6Q9UQ52 1028 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 INSL5Q9Y5Q6 135 aa5.15□□□□□ -1.59
UBE2D3-225ENST00000508476 MSI1O43347 362 aaKnown RBP5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 IFNA2P01563 188 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 PLA2G2AP14555 144 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 ZBTB16Q05516 673 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 PMPCAQ10713 525 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 GALNT3Q14435 633 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 ZNF569Q5MCW4 686 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 TTC39AQ5SRH9 613 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 TMEM88Q6PEY1 159 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 CTU1Q7Z7A3 348 aaKnown RBP5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 FAM71BQ8TC56 605 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 HMGB4Q8WW32 186 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 OIT3Q8WWZ8 545 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 LPAR1Q92633 364 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 ZNF479Q96JC4 524 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 RBM38Q9H0Z9 239 aaKnown RBP5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 SIRT3Q9NTG7 399 aaPredicted RBP5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 TNFSF13BQ9Y275 285 aa5.14□□□□□ -1.59
UBE2D3-225ENST00000508476 MCIDASD6RGH6 385 aa5.13□□□□□ -1.59
UBE2D3-225ENST00000508476 MDM4O15151 490 aa5.13□□□□□ -1.59
UBE2D3-225ENST00000508476 ADPRHP54922 357 aa5.13□□□□□ -1.59
UBE2D3-225ENST00000508476 ZNF585BQ52M93 769 aa5.13□□□□□ -1.59
UBE2D3-225ENST00000508476 CCSAPQ6IQ19 270 aaPredicted RBP5.13□□□□□ -1.59
UBE2D3-225ENST00000508476 ZPBPQ9BS86 351 aa5.13□□□□□ -1.59
UBE2D3-225ENST00000508476 FRMD8Q9BZ67 464 aaPredicted RBP5.13□□□□□ -1.59
UBE2D3-225ENST00000508476 MYLK2Q9H1R3 596 aa5.13□□□□□ -1.59
UBE2D3-225ENST00000508476 ARFGAP3Q9NP61 516 aa5.13□□□□□ -1.59
UBE2D3-225ENST00000508476 NFU1Q9UMS0 254 aa5.13□□□□□ -1.59
UBE2D3-225ENST00000508476 MAGED2Q9UNF1 606 aaPredicted RBP5.13□□□□□ -1.59
UBE2D3-225ENST00000508476 A0A087WV62 115 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 GOLGA6L3A6NEY3 463 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 KCNJ18B7U540 433 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 FFAR2O15552 330 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 HEXIM1O94992 359 aaKnown RBP5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 CDC25AP30304 524 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 PGGT1BP53609 377 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 GALNT1Q10472 559 aaPredicted RBP5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 TRIM60Q495X7 471 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 WASHC2DQ5SRD0 308 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 KDELC2Q7Z4H8 507 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 TMEM217Q8N7C4 229 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 FAM110DQ8TAY7 271 aaPredicted RBP5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 MIB2Q96AX9 1013 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 THOC3Q96J01 351 aaKnown RBP5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 TMEM120AQ9BXJ8 343 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 KRTAP2-2Q9BYT5 123 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 PCDHA10Q9Y5I2 948 aa5.12□□□□□ -1.59
UBE2D3-225ENST00000508476 TCRBV7S3A2A0A539 114 aa5.11□□□□□ -1.59
UBE2D3-225ENST00000508476 NGFRP08138 427 aa5.11□□□□□ -1.59
UBE2D3-225ENST00000508476 IFIT2P09913 472 aaKnown RBP5.11□□□□□ -1.59
UBE2D3-225ENST00000508476 PDIA3P30101 505 aaKnown RBP5.11□□□□□ -1.59
UBE2D3-225ENST00000508476 RCAN1P53805 252 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms