RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ANAPC16Q96DE5 110 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 RSRC1Q96IZ7 334 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ACE2Q9BYF1 805 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ASPSCR1Q9BZE9 553 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TPSD1Q9BZJ3 242 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 COPS7BQ9H9Q2 264 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 MTMR10Q9NXD2 777 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ZDHHC7Q9NXF8 308 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TAB2Q9NYJ8 693 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 SCHIP1Q9P0W5 487 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 STX18Q9P2W9 335 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 DAAM1Q9Y4D1 1078 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PCDHGC5Q9Y5F6 944 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TANC1Q9C0D5 1861 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PDZK1P1A8MUH7 402 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 SOX1O00570 391 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ATP9AO75110 1047 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GUCA1CO95843 209 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 BRAFP15056 766 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CYP3A5P20815 502 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ATP6V1C1P21283 382 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 LIG3P49916 1009 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ZNF284Q2VY69 593 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PLA2G4EQ3MJ16 856 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 BEND5Q7L4P6 421 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TAF8Q7Z7C8 310 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 HJURPQ8NCD3 748 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CYB5D2Q8WUJ1 264 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 SMARCD2Q92925 531 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CYFIP2Q96F07 1278 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 SNX27Q96L92 541 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 KCNS3Q9BQ31 491 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GPR174Q9BXC1 333 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 NIFKQ9BYG3 293 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GOLGA2P5Q9HBQ8 144 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 COMMD8Q9NX08 183 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GMIPQ9P107 970 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 VPS18Q9P253 973 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 DNAJB4Q9UDY4 337 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 SMG5Q9UPR3 1016 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 HEY1Q9Y5J3 304 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 FRMPD4Q14CM0 1322 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 A6NCN8 305 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 A8MX80 341 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TOM1L1O75674 476 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 DGKIO75912 1065 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GJB6O95452 261 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 EIF2S1P05198 315 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GARTP22102 1010 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 EEF1GP26641 437 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GTF2E2P29084 291 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CORO1AP31146 461 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 MAT2AP31153 395 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 SCNN1AP37088 669 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 RHOAP61586 193 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CAPSQ13938 189 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TFDP2Q14188 446 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 FGL2Q14314 439 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PCSK7Q16549 785 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 RGS21Q2M5E4 152 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TTC23Q5W5X9 447 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 LHX8Q68G74 356 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 KRT39Q6A163 491 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 MMS22LQ6ZRQ5 1243 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GRAMD1CQ8IYS0 662 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 EXD1Q8NHP7 514 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 DEPDC1BQ8WUY9 529 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 EDEM1Q92611 657 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 P2RX5Q93086 422 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 KIAA1143Q96AT1 154 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 MTMR8Q96EF0 704 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GKN1Q9NS71 199 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 KLHL11Q9NVR0 708 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ARHGAP28Q9P2N2 729 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 USP20Q9Y2K6 914 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PKP3Q9Y446 797 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CCDC78A2IDD5 438 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PRRT4C9JH25 899 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CACNB4O00305 520 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 KCNK3O14649 394 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 FPGTO14772 594 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ADAMTS4O75173 837 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 KATNA1O75449 491 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GALTP07902 379 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 STX2P32856 288 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 HALP42357 657 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CLCN4P51793 760 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CASP6P55212 293 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 HDAC4P56524 1084 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PTENP60484 403 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ERVFC1P60507 584 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 USP46P62068 366 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 BST2Q10589 180 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 RCN2Q14257 317 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 NCAPHQ15003 741 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ACAP2Q15057 778 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 AMZ1Q400G9 498 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ITPRIPL1Q6GPH6 555 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PSAPL1Q6NUJ1 521 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms