RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 AMIGO2Q86SJ2 522 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 TDRPQ86YL5 185 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 WDR48Q8TAF3 677 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 POMGNT1Q8WZA1 660 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 LPPQ93052 612 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 MYDGFQ969H8 173 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 GPN2Q9H9Y4 310 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 AKIP1Q9NQ31 210 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 SLC35C2Q9NQQ7 365 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 ARHGAP20Q9P2F6 1191 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 ANKFY1Q9P2R3 1169 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 ZNF221Q9UK13 617 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 AGO1Q9UL18 857 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 CLEC4AQ9UMR7 237 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 PSMD13Q9UNM6 376 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 INVSQ9Y283 1065 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 UGT2A1Q9Y4X1 527 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 KCNE2Q9Y6J6 123 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 CPS1P31327 1500 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 ARHGEF37A1IGU5 675 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 FAM155AB1AL88 458 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 J3QRK9 145 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 PLOD2O00469 737 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 CCNDBP1O95273 360 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 NADKO95544 446 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 GOT2P00505 430 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 RAG1P15918 1043 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 TRHRP34981 398 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 ALDH1A3P47895 512 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 LEPRP48357 1165 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 CLCN4P51793 760 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 CLCNKBP51801 687 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 HIRAP54198 1017 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 AIF1P55008 147 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 HADHBP55084 474 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 KCNQ4P56696 695 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 PPARDQ03181 441 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 BST2Q10589 180 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 NFATC3Q12968 1075 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 TOP3AQ13472 1001 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 COL9A3Q14050 684 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 ERV3-1Q14264 604 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 MORF4L2Q15014 288 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 RPS6KA1Q15418 735 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 LTB4RQ15722 352 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 ZNF827Q17R98 1081 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 GARNL3Q5VVW2 1013 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 CRTC1Q6UUV9 634 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 LDHAL6AQ6ZMR3 332 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 SCUBE3Q8IX30 993 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 DEPDC4Q8N2C3 294 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 CPA6Q8N4T0 437 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 CCDC33Q8N5R6 958 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 OR8H1Q8NGG4 311 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 GRK7Q8WTQ7 553 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 FIG4Q92562 907 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 RNF34Q969K3 372 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 TMIGD2Q96BF3 282 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 FBXL8Q96CD0 374 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 MKNK1Q9BUB5 465 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 TEX13BQ9BXU2 312 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 PPA2Q9H2U2 334 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 TRIM45Q9H8W5 580 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 ZNF556Q9HAH1 456 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 SSU72Q9NP77 194 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 SRRDQ9UH36 339 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 CYB5R1Q9UHQ9 305 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 DBNLQ9UJU6 430 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 CBY1Q9Y3M2 126 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 KIAA0556O60303 1618 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 STK36Q9NRP7 1315 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 CHD4Q14839 1912 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 CHURC1-FNTBB4DL54 471 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 I3L4J1 428 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 NDUFS2O75306 463 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 ALDH1A2O94788 518 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 CPB1P15086 417 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 ITIH2P19823 946 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 WDR4P57081 412 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 CTBSQ01459 385 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 FLI1Q01543 452 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 UBE3AQ05086 875 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 DPYDQ12882 1025 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 FAM47CQ5HY64 1035 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 GNASQ5JWF2 1037 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 CCDC149Q6ZUS6 474 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 LIX1LQ8IVB5 337 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 ZSCAN29Q8IWY8 852 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 ZBTB38Q8NAP3 1195 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 SYN2Q92777 582 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 PTP4A1Q93096 173 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 YIPF5Q969M3 257 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 RAB7BQ96AH8 199 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 TCEANC2Q96MN5 208 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 GCNAQ96QF7 691 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 CYTH2Q99418 400 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 TMEM246Q9BRR3 403 aa11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 GCOM2Q9BZD3 368 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-210ENST00000508216 VRTNQ9H8Y1 702 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms