RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SPOPO43791 374 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 CREB3O43889 395 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 GPR37L1O60883 481 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 PALMO75781 387 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 KAT7O95251 611 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 PDGFBP01127 241 aaPredicted RBP13.22□□□□□ -0.29
TCOF1-210ENST00000506767 DRD1P21728 446 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 IL4RP24394 825 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 TARSP26639 723 aaKnown RBP13.22□□□□□ -0.29
TCOF1-210ENST00000506767 GRIA2P42262 883 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 CCINQ13939 588 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 PDK2Q15119 407 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 PREPLQ4J6C6 727 aaPredicted RBP13.22□□□□□ -0.29
TCOF1-210ENST00000506767 GRAMD4Q6IC98 578 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 CXorf57Q6NSI4 855 aaKnown RBP13.22□□□□□ -0.29
TCOF1-210ENST00000506767 BMP8AQ7Z5Y6 402 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 SETD3Q86TU7 594 aaPredicted RBP13.22□□□□□ -0.29
TCOF1-210ENST00000506767 NT5DC3Q86UY8 548 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 SYCE1Q8N0S2 351 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 TERB1Q8NA31 727 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 OR52K2Q8NGK3 314 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 FAM122AQ96E09 287 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 PCDH18Q9HCL0 1135 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 ARHGEF4Q9NR80 690 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 TMEM248Q9NWD8 314 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 CWC15Q9P013 229 aaKnown RBP13.22□□□□□ -0.29
TCOF1-210ENST00000506767 RCOR3Q9P2K3 495 aaPredicted RBP13.22□□□□□ -0.29
TCOF1-210ENST00000506767 PYCARDQ9ULZ3 195 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 MRPS17Q9Y2R5 130 aaKnown RBP13.22□□□□□ -0.29
TCOF1-210ENST00000506767 HCN4Q9Y3Q4 1203 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 MTF2Q9Y483 593 aaPredicted RBP13.22□□□□□ -0.29
TCOF1-210ENST00000506767 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.22□□□□□ -0.29
TCOF1-210ENST00000506767 TECTAO75443 2155 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 C3orf70A6NLC5 250 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 K7EQS6 105 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 EEF2KO00418 725 aaKnown RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 FGF10O15520 208 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 ZSCAN12O43309 604 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 EGFP01133 1207 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 APODP05090 189 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 CD48P09326 243 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 CHRNB1P11230 501 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 GOT1P17174 413 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 KDELR1P24390 212 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 EPHB2P29323 1055 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 CD70P32970 193 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 CTNNA1P35221 906 aaKnown RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 TNFRSF4P43489 277 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 MAPKAPK2P49137 400 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 PLK1P53350 603 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 CDH6P55285 790 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 TPI1P60174 286 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 KDSRQ06136 332 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 GRSF1Q12849 480 aaKnown RBP eCLIP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 LMAN2Q12907 356 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 ZNF177Q13360 481 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 SLC12A1Q13621 1099 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 CDH18Q13634 790 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 DPYSQ14117 519 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 DPYSL3Q14195 570 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 GEN1Q17RS7 908 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 PPP6R3Q5H9R7 873 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 TMEM215Q68D42 235 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 CWF19L1Q69YN2 538 aaKnown RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 RWDD4Q6NW29 188 aaKnown RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 RFX8Q6ZV50 586 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 VSIG1Q86XK7 387 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 SFTPA1Q8IWL2 248 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 PJA1Q8NG27 643 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 UBE2Q2Q8WVN8 375 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 RAPGEF5Q92565 580 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 CLDN23Q96B33 292 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 ALG14Q96F25 216 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 FOXQ1Q9C009 403 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 CATSPERBQ9H7T0 1116 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 ABCB8Q9NUT2 735 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 NDFIP2Q9NV92 336 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 DDX56Q9NY93 547 aaKnown RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 KIAA1522Q9P206 1035 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 GGA2Q9UJY4 613 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 INTS6Q9UL03 887 aaKnown RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 NDRG2Q9UN36 371 aaKnown RBP13.21□□□□□ -0.29
TCOF1-210ENST00000506767 STARD13Q9Y3M8 1113 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 PCDHA3Q9Y5H8 950 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 OR51B4Q9Y5P0 310 aa13.21□□□□□ -0.29
TCOF1-210ENST00000506767 CHD5Q8TDI0 1954 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 FAM170BA6NMN3 283 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 ZNF487B1APH4 448 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 PRRT4C9JH25 899 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 H3BRJ5 948 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 PABPC1P11940 636 aaKnown RBP13.2□□□□□ -0.3
TCOF1-210ENST00000506767 ERCC2P18074 760 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 CTNNA2P26232 953 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 OR1E1P30953 314 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 GJC1P36383 396 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 ARL4AP40617 200 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 PEX5P50542 639 aa13.2□□□□□ -0.3
TCOF1-210ENST00000506767 OXCT1P55809 520 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms