RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 XPO7Q9UIA9 1087 aaKnown RBP7.51□□□□□ -1.21
GYPB-206ENST00000506516 PLA2G4CQ9UP65 541 aa7.51□□□□□ -1.21
GYPB-206ENST00000506516 HS3ST4Q9Y661 456 aa7.51□□□□□ -1.21
GYPB-206ENST00000506516 SCINQ9Y6U3 715 aa7.51□□□□□ -1.21
GYPB-206ENST00000506516 MYO16Q9Y6X6 1858 aa7.51□□□□□ -1.21
GYPB-206ENST00000506516 WDFY4Q6ZS81 3184 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 AKR1B10O60218 316 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 GFRA3O60609 400 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 MFAP3LO75121 409 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 PAGE1O75459 146 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 RNF8O76064 485 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 ALDH1A2O94788 518 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 LUC7L3O95232 432 aaKnown RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 MOCS3O95396 460 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 GJB6O95452 261 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 KLF8O95600 359 aaPredicted RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 ATP5BP06576 529 aaKnown RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 POLR2EP19388 210 aaKnown RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 TFE3P19532 575 aaPredicted RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 NTSR1P30989 418 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 HOXA6P31267 233 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 CNR2P34972 360 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 ADRA1BP35368 520 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 EIF4A3P38919 411 aaKnown RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 KIR2DL1P43626 348 aaPredicted RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 DGKEP52429 567 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 AIF1P55008 147 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 ADKP55263 362 aaKnown RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 OXCT1P55809 520 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 ZNF177Q13360 481 aaPredicted RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 MAMLD1Q13495 774 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 SLC12A1Q13621 1099 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 CDH18Q13634 790 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 DMC1Q14565 340 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 GEN1Q17RS7 908 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 C15orf59Q2T9L4 293 aaPredicted RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 CCDC122Q5T0U0 273 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 EMC10Q5UCC4 262 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 E4F1Q66K89 784 aaPredicted RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 PLEKHA7Q6IQ23 1121 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 ALKBH5Q6P6C2 394 aaKnown RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 TSSK4Q6SA08 328 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 TMC6Q7Z403 805 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 LONP2Q86WA8 852 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 FAM131BQ86XD5 332 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 GAS2L3Q86XJ1 694 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 MFN1Q8IWA4 741 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 CHPFQ8IZ52 775 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 AHI1Q8N157 1196 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 CFAP52Q8N1V2 620 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 CCDC33Q8N5R6 958 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 ALLCQ8N6M5 410 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 TXNDC5Q8NBS9 432 aaKnown RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 WFIKKN2Q8TEU8 576 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 FAM172AQ8WUF8 416 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 CENPIQ92674 756 aaPredicted RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 ZNF653Q96CK0 615 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 FAM122AQ96E09 287 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 MRFAP1L1Q96HT8 127 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 MCEEQ96PE7 176 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 DNAJC7Q99615 494 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 PRMT1Q99873 361 aaKnown RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 NCAPGQ9BPX3 1015 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 CNPY3Q9BT09 278 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 CIPCQ9C0C6 399 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 SEMA4AQ9H3S1 761 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 ABHD10Q9NUJ1 306 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 ZSCAN32Q9NX65 697 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 ELOVL2Q9NXB9 296 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 CALCOCO1Q9P1Z2 691 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 ARHGAP20Q9P2F6 1191 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 VANGL2Q9ULK5 521 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 MMP17Q9ULZ9 603 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 PCDHB11Q9Y5F2 797 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 PCDHGA2Q9Y5H1 932 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 COL4A3Q01955 1670 aa7.5□□□□□ -1.21
GYPB-206ENST00000506516 HELZP42694 1942 aaKnown RBP7.5□□□□□ -1.21
GYPB-206ENST00000506516 COL4A2P08572 1712 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 A0A087X0T9 212 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 CCDC163A0A0D9SF12 145 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 A0A1B0GVM2 712 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 SSU72P8A0A1W2PR75 194 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 TCRBV5S1A1TA0A578 114 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 TCAF2A6NFQ2 919 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 TMEM191CA6NGB0 347 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 PRRT4C9JH25 899 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 K7ESF4 209 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 AP5Z1O43299 807 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 SRGAP2O75044 1071 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 CLDN11O75508 207 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 APBB3O95704 486 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 PLEKP08567 350 aaPredicted RBP7.49□□□□□ -1.21
GYPB-206ENST00000506516 FAM228BP0C875 321 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 PABPC1P11940 636 aaKnown RBP7.49□□□□□ -1.21
GYPB-206ENST00000506516 HNRNPLP14866 589 aaKnown RBP eCLIP7.49□□□□□ -1.211e-6■■■□□ 17.3
GYPB-206ENST00000506516 HLA-FP30511 346 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 SGSHP51688 502 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 ZNF75DP51815 510 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 ATXN1P54253 815 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms