RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 MTFR1LQ9H019 292 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 DUSP15Q9H1R2 295 aaPredicted RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 RAD21L1Q9H4I0 556 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 KCND2Q9NZV8 630 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 MARCH2Q9P0N8 246 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TRIM10Q9UDY6 481 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SEC63Q9UGP8 760 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 NENFQ9UMX5 172 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 MAPRE3Q9UPY8 281 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 KCNH4Q9UQ05 1017 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 MYH7BA7E2Y1 1941 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TCHHQ07283 1943 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ARHGAP10A1A4S6 786 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 C10orf142B7Z368 130 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 H0Y626 953 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 MAGEB3O15480 346 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 BNIP3LO60238 219 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 KLHL41O60662 606 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 CLEC3AO75596 197 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 YEATS4O95619 227 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 AHSGP02765 367 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 HPGDP15428 266 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF12P17014 697 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 RFC4P35249 363 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 GIPRP48546 466 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ALDH6A1Q02252 535 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 MGAT5Q09328 741 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 DCTN2Q13561 401 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 C3orf36Q3SXR2 165 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 DCAF6Q58WW2 860 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 PRMT9Q6P2P2 845 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 UGT2A3Q6UWM9 527 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 KIAA0319LQ8IZA0 1049 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 OR6C4Q8NGE1 309 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 GATAD2BQ8WXI9 593 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 MROQ9BYG7 248 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SLC13A1Q9BZW2 595 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TMBIM4Q9HC24 238 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 INTS7Q9NVH2 962 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 GMIPQ9P107 970 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 RNF112Q9ULX5 631 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 LIMCH1Q9UPQ0 1083 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 EXOC7Q9UPT5 735 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 STARD13Q9Y3M8 1113 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SPTBN5Q9NRC6 3674 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 H3BQV1 296 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TRDMT1O14717 391 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TMCC2O75069 709 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ALDH1A2O94788 518 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ARHGEF15O94989 841 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 CHMP24386 653 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 HMGB2P26583 209 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 PTGIRP43119 386 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 PDE6CP51160 858 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 AP1S2P56377 157 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 HSD17B7P56937 341 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 CABP4P57796 275 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 KCNJ2P63252 427 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 GALK2Q01415 458 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 PRKCQQ04759 706 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SPIRE1Q08AE8 756 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 AP3B2Q13367 1082 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF124Q15973 351 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 AGAP7PQ5VUJ5 663 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 EMBQ6PCB8 327 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 C2CD5Q86YS7 1000 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ZSWIM2Q8NEG5 633 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 CCDC148Q8NFR7 591 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SLC44A1Q8WWI5 657 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TMEM80Q96HE8 168 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 HIC2Q96JB3 615 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SEC16BQ96JE7 1060 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 FAM84AQ96KN4 292 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ZFP42Q96MM3 310 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ASB2Q96Q27 587 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 NUDCD1Q96RS6 583 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 DBNDD2Q9BQY9 259 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SELENOOQ9BVL4 669 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 FOXP1Q9H334 677 aaPredicted RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 GHITMQ9H3K2 345 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TAF1DQ9H5J8 278 aaPredicted RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SLC38A10Q9HBR0 1119 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SMYD2Q9NRG4 433 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 DNAJB12Q9NXW2 375 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 CDC42EP3Q9UKI2 254 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 AP3M1Q9Y2T2 418 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SNX14Q9Y5W7 946 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 CEPT1Q9Y6K0 416 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 GOLGA6L7A0A1B0GV03 622 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 PRR33A8MZF0 331 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 O00370 1275 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 PTP4A3O75365 173 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 CBR3O75828 277 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 KRT3P12035 628 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 YBX3P16989 372 aaKnown RBP eCLIP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 LIMK1P53667 647 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 AP2S1P53680 142 aaPredicted RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SPEM2Q0P670 501 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TFCP2Q12800 502 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 DUSP4Q13115 394 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms