RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 PRAMEF26H0Y7S4 382 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 TMX2-CTNND1H3BSU7 103 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 KCNN4O15554 427 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 SPINT1O43278 529 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 TIMM44O43615 452 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 SIN3BO75182 1162 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 MED24O75448 989 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 RNASEH2AO75792 299 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 TBX18O95935 607 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 ABL1P00519 1130 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 F9P00740 461 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 CSF2P04141 144 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 RPLP0P05388 317 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 CLTAP09496 248 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 COX6B1P14854 86 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 GOT1P17174 413 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 PTPN1P18031 435 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 GUCY2CP25092 1073 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 LMO2P25791 158 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 HTR1EP28566 365 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 ADD1P35611 737 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 TAF6P49848 677 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 IST1P53990 364 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 ITGA1P56199 1179 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 TAS2R38P59533 333 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 HNRNPKP61978 463 aaKnown RBP eCLIP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 PSMC1P62191 440 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 YBX1P67809 324 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 PDE4CQ08493 712 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 EIF2B5Q13144 721 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 PTK2BQ14289 1009 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 STAT4Q14765 748 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 ARID5BQ14865 1188 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 PPP2R5AQ15172 486 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 NTRK3Q16288 839 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 FNDC3BQ53EP0 1204 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 DCAF10Q5QP82 559 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 HECTD3Q5T447 861 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 C9orf64Q5T6V5 341 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 C20orf194Q5TEA3 1177 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 CEP135Q66GS9 1140 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 BNC2Q6ZN30 1099 aaPredicted RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 SPATA2LQ8IUW3 424 aaPredicted RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 MMAAQ8IVH4 418 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 OR14C36Q8NHC7 312 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 SCAMP5Q8TAC9 235 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 BICD2Q8TD16 824 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 KBTBD7Q8WVZ9 684 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 OVCA2Q8WZ82 227 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 NDRG1Q92597 394 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 PCED1BQ96HM7 432 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 LMLNQ96KR4 655 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 C8orf48Q96LL4 319 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 DRC1Q96MC2 740 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 GFM1Q96RP9 751 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 TSPAN18Q96SJ8 248 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 CMKLR1Q99788 373 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 FOXC2Q99958 501 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 CLPBQ9H078 707 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 SLKQ9H2G2 1235 aaPredicted RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 TCEAL2Q9H3H9 227 aaPredicted RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 LRRN3Q9H3W5 708 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 GPN2Q9H9Y4 310 aaPredicted RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 DIAPH3Q9NSV4 1193 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 OSER1Q9NX31 292 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 DNAJC28Q9NX36 388 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 CHORDC1Q9UHD1 332 aaPredicted RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 RCAN3Q9UKA8 241 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 PADI4Q9UM07 663 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 NCKAP1Q9Y2A7 1128 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 PCDHGB6Q9Y5F9 930 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 PCDHGA9Q9Y5G4 932 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 OAS3Q9Y6K5 1087 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 CHD5Q8TDI0 1954 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 PRKDCP78527 4128 aaKnown RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 TBC1D3DA0A087WVF3 549 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 TBC1D3IA0A087WXS9 549 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 TBC1D3EA0A087X179 549 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 TBC1D3KA0A087X1G2 549 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 SPTY2D1-AS1A0A0U1RR47 76 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 TBC1D3FA6NER0 549 aaPredicted RBP3.49□□□□□ -1.85
TCOF1-208ENST00000506063 TBC1D3LB9A6J9 549 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 WNT7AO00755 349 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 MDM4O15151 490 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 AQP9O43315 295 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 XPOTO43592 962 aaKnown RBP3.49□□□□□ -1.85
TCOF1-208ENST00000506063 PLRG1O43660 514 aaKnown RBP3.49□□□□□ -1.85
TCOF1-208ENST00000506063 TLR5O60602 858 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 RNGTTO60942 597 aaKnown RBP3.49□□□□□ -1.85
TCOF1-208ENST00000506063 STC2O76061 302 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 F12P00748 615 aaPredicted RBP3.49□□□□□ -1.85
TCOF1-208ENST00000506063 HEXAP06865 529 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 CELA2BP08218 269 aaPredicted RBP3.49□□□□□ -1.85
TCOF1-208ENST00000506063 STSP08842 583 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 DLDP09622 509 aaKnown RBP3.49□□□□□ -1.85
TCOF1-208ENST00000506063 TBC1D3HP0C7X1 549 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 VAV1P15498 845 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 PRLRP16471 622 aa3.49□□□□□ -1.85
TCOF1-208ENST00000506063 TCN2P20062 427 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms