RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 BHLHA9Q7RTU4 235 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 SCFD2Q8WU76 684 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 GLMPQ8WWB7 406 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 RUFY2Q8WXA3 655 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 GLG1Q92896 1179 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 JAKMIP2Q96AA8 810 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 ELP4Q96EB1 424 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 PRRX2Q99811 253 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 CLPBQ9H078 707 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 GALNT9Q9HCQ5 603 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 SEMA4BQ9NPR2 832 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 THAP1Q9NVV9 213 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 AURKAIP1Q9NWT8 199 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 EHD2Q9NZN4 543 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 MPP6Q9NZW5 540 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 PCDHGB4Q9UN71 923 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 FER1L4A9Z1Z3 1794 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TRGV11A0A075B6L2 103 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 CYP3A7-CYP3A51PA0A087WV96 503 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 GAGE12BA1L429 117 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 GAGE12HA6NDE8 117 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TSPY2A6NKD2 308 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 C16orf96A6NNT2 1141 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 AGAP14A8MT82 685 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 CAPN14A8MX76 684 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 H7C0S8 307 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 GRM8O00222 908 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TNFSF14O43557 240 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 ALDOAP04075 364 aaKnown RBP4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 ELANEP08246 267 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TSPY3P0CV98 308 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TSPY8P0CW00 308 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 NR2F1P10589 423 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 CREB1P16220 341 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 IL11P20809 199 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 MATN1P21941 496 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 GATA3P23771 443 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 CYP3A7P24462 503 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 ACRV1P26436 265 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 NNMTP40261 264 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 RGS2P41220 211 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 FOXL2P58012 376 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TAS2R50P59544 299 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 KRTAP10-11P60412 298 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 IFI35P80217 286 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TSPY1Q01534 308 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 ITIH3Q06033 890 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 CDK18Q07002 472 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 NEXNQ0ZGT2 675 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 STK4Q13043 487 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 DNASE1L3Q13609 305 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TUBA3CQ13748 450 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 CRYMQ14894 314 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TAF11Q15544 211 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TBCCQ15814 346 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 GEN1Q17RS7 908 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 B3GNTL1Q67FW5 361 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 DENND2CQ68D51 928 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 GRHL2Q6ISB3 625 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 NAA16Q6N069 864 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TUBA3EQ6PEY2 450 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 C16orf89Q6UX73 402 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 LRRC55Q6ZSA7 311 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 RRM2BQ7LG56 351 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 SZRD1Q7Z422 152 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TMPRSS6Q8IU80 811 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 B3GALNT2Q8NCR0 500 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 OR52L2PQ8NGH6 319 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 POMGNT1Q8WZA1 660 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 NELL1Q92832 810 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 RNF31Q96EP0 1072 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 RNFT2Q96EX2 444 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 EYA3Q99504 573 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 MXD3Q9BW11 206 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 CINPQ9BW66 212 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 SMARCAD1Q9H4L7 1026 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TMEM74BQ9NUR3 256 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 ZDHHC7Q9NXF8 308 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 TRPM5Q9NZQ8 1165 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 LIMA1Q9UHB6 759 aaKnown RBP4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 ZHX1Q9UKY1 873 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 CHST2Q9Y4C5 530 aa4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 COPG1Q9Y678 874 aaKnown RBP4.2□□□□□ -1.74
TRAPPC13-208ENST00000505553 GRXCR1A8MXD5 290 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 MASP2O00187 686 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 TMPRSS11DO60235 418 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 CCNT1O60563 726 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 PMPCBO75439 489 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 BEST1O76090 585 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 ZFPL1O95159 310 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 VNN1O95497 513 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 ONECUT2O95948 504 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 ADRB2P07550 413 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 C1SP09871 688 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 CDH2P19022 906 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 TM4SF1P30408 202 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 GKP32189 559 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 PPARGP37231 505 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 CTCFP49711 727 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 RPS6KA3P51812 740 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms