RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 OTUD6AQ7L8S5 288 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 MYLK4Q86YV6 388 aaPredicted RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 SRRM1Q8IYB3 904 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 CPA6Q8N4T0 437 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 GLIS1Q8NBF1 620 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 CHST14Q8NCH0 376 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 NPLOC4Q8TAT6 608 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 MGARPQ8TDB4 240 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 FNIP1Q8TF40 1166 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 FAM151AQ8WW52 585 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 ERP27Q96DN0 273 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 RTP4Q96DX8 246 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SPDL1Q96EA4 605 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 C1orf21Q9H246 121 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 APOBEC3GQ9HC16 384 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 SEPT11Q9NVA2 429 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 WDR35Q9P2L0 1181 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 NXF1Q9UBU9 619 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 HAO1Q9UJM8 370 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 BACE2Q9Y5Z0 518 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SLC4A7Q9Y6M7 1214 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 WDR81Q562E7 1941 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SMCHD1A6NHR9 2005 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 EME2A4GXA9 379 aaPredicted RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 H0YCG3 227 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SLC16A4O15374 487 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 MAFGO15525 162 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 OIP5O43482 229 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 TJP3O95049 919 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 PRAMEF1O95521 474 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 CCNE2O96020 404 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 CALRP27797 417 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 TUBP50607 506 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 KPNA1P52294 538 aaPredicted RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 RAD23BP54727 409 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SESN3P58005 492 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 ROR2Q01974 943 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 CREB5Q02930 508 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 BTKQ06187 659 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SLC34A1Q06495 639 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SLC5A9Q2M3M2 681 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 KLHL38Q2WGJ6 581 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 DEFB115Q30KQ5 88 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 P3H1Q32P28 736 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 TAF1BQ53T94 588 aaPredicted RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 NAIF1Q69YI7 327 aaPredicted RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 TIFABQ6ZNK6 161 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 BBS12Q6ZW61 710 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 ANO5Q75V66 913 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 USP37Q86T82 979 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 NPAS3Q8IXF0 933 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 WDTC1Q8N5D0 677 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 ACER1Q8TDN7 264 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 USP33Q8TEY7 942 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 FRS2Q8WU20 508 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 CHTF18Q8WVB6 975 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 DNAJC9Q8WXX5 260 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 CPT1BQ92523 772 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 DCPSQ96C86 337 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 BICD1Q96G01 975 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 C9orf72Q96LT7 481 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 C7orf26Q96N11 449 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SMC6Q96SB8 1091 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SARGQ9BW04 601 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 OSBPL1AQ9BXW6 950 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 FAM192AQ9GZU8 254 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 HAPLN2Q9GZV7 340 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 MRPL18Q9H0U6 180 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 SYNCQ9H7C4 482 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SAYSD1Q9NPB0 183 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SLCO1B3Q9NPD5 702 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 XPNPEP1Q9NQW7 623 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 PARVAQ9NVD7 372 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 ARL8BQ9NVJ2 186 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 DNPEPQ9ULA0 475 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SSX2IPQ9Y2D8 614 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 LRCH1Q9Y2L9 728 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 GIT1Q9Y2X7 761 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 A0A0A0MRY4 1105 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 EXOC1LA0A1B0GW35 172 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 SHISA8B8ZZ34 492 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 LCE2BO14633 110 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 BUD23O43709 281 aaKnown RBP4.05□□□□□ -1.76
CLTC-209ENST00000498711 AP1G1O43747 822 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 FAM189A1O60320 539 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 GDF11O95390 407 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 PSMG1O95456 288 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 CFBP00751 764 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 HLA-DRAP01903 254 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 CKMP06732 381 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 CD3EP07766 207 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 VSIG8P0DPA2 414 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 HSPA8P11142 646 aaKnown RBP4.05□□□□□ -1.76
CLTC-209ENST00000498711 RAB6AP20340 208 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 TBXAS1P24557 533 aaPredicted RBP4.05□□□□□ -1.76
CLTC-209ENST00000498711 EPHB2P29323 1055 aa4.05□□□□□ -1.76
CLTC-209ENST00000498711 CRABP2P29373 138 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms