RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 TOR4AQ9NXH8 423 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 TJP2Q9UDY2 1190 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 ERVW-1Q9UQF0 538 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 NAALADL1Q9UQQ1 740 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 BTBD3Q9Y2F9 522 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 GPSM3Q9Y4H4 160 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 PLXNB3Q9ULL4 1909 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 LAMA5O15230 3695 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 EDDM13A0A1B0GTR0 161 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 A0A1W2PPC4 97 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 BICDL2A1A5D9 508 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 TRABD2BA6NFA1 517 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 MID1O15344 667 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 MED7O43513 233 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 DKK1O94907 266 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 GNA14O95837 355 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 MOCS2O96007 188 aaPredicted RBP12.45□□□□□ -0.42
CNOT4-211ENST00000498534 FYNP06241 537 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 IGHV4-34P06331 123 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 KRT5P13647 590 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 HOXB3P14651 431 aaPredicted RBP12.45□□□□□ -0.42
CNOT4-211ENST00000498534 GCNT1Q02742 428 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 DCAF6Q58WW2 860 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 PITRM1Q5JRX3 1037 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 C9orf64Q5T6V5 341 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 KLHL10Q6JEL2 608 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 NCEH1Q6PIU2 408 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 BEND5Q7L4P6 421 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 OR2T34Q8NGX1 318 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 LMO3Q8TAP4 145 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 ADAM32Q8TC27 787 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 STK32AQ8WU08 396 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 KAT5Q92993 513 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 MYO19Q96H55 970 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 SLC39A13Q96H72 371 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 FCRL2Q96LA5 508 aaPredicted RBP12.45□□□□□ -0.42
CNOT4-211ENST00000498534 MRGPRX3Q96LB0 322 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 MED15Q96RN5 788 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 PPP1R9BQ96SB3 815 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 NUCKS1Q9H1E3 243 aaKnown RBP12.45□□□□□ -0.42
CNOT4-211ENST00000498534 AASDHPPTQ9NRN7 309 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 DKK4Q9UBT3 224 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 FTSJ1Q9UET6 329 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 INTS6Q9UL03 887 aaKnown RBP12.45□□□□□ -0.42
CNOT4-211ENST00000498534 FZD4Q9ULV1 537 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 TPX2Q9ULW0 747 aaKnown RBP12.45□□□□□ -0.42
CNOT4-211ENST00000498534 PTPRBP23467 1997 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 KNTC1P50748 2209 aa12.45□□□□□ -0.42
CNOT4-211ENST00000498534 URB1O60287 2271 aaKnown RBP12.44□□□□□ -0.42
CNOT4-211ENST00000498534 A0A1B0GTQ1 180 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 A0A1W2PP55 124 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 TTC34A8MYJ7 566 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 LUC7L3O95232 432 aaKnown RBP12.44□□□□□ -0.42
CNOT4-211ENST00000498534 ADH1BP00325 375 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 CALCAP01258 141 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 CDK4P11802 303 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 GOT1P17174 413 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 ABCB4P21439 1286 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 C5AR1P21730 350 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 CD38P28907 300 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 GPD2P43304 727 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 RPL34P49207 117 aaKnown RBP12.44□□□□□ -0.42
CNOT4-211ENST00000498534 CCR5P51681 352 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 YWHAZP63104 245 aaKnown RBP12.44□□□□□ -0.42
CNOT4-211ENST00000498534 IL9RQ01113 521 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 KCNH2Q12809 1159 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 SLC12A1Q13621 1099 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 SLC45A4Q5BKX6 768 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 FSCBQ5H9T9 825 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 KCNT1Q5JUK3 1230 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 LAYNQ6UX15 382 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 MMS22LQ6ZRQ5 1243 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 SND1Q7KZF4 910 aaKnown RBP eCLIP12.44□□□□□ -0.42
CNOT4-211ENST00000498534 ELOA2Q8IYF1 753 aaPredicted RBP12.44□□□□□ -0.42
CNOT4-211ENST00000498534 LGI2Q8N0V4 545 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 HNRNPLLQ8WVV9 542 aaKnown RBP12.44□□□□□ -0.42
CNOT4-211ENST00000498534 BTN2A3PQ96KV6 586 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 PRICKLE1Q96MT3 831 aaPredicted RBP12.44□□□□□ -0.42
CNOT4-211ENST00000498534 FAM129BQ96TA1 746 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 ELF4Q99607 663 aaPredicted RBP12.44□□□□□ -0.42
CNOT4-211ENST00000498534 ORAI3Q9BRQ5 295 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 THAP9Q9H5L6 903 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.44□□□□□ -0.42
CNOT4-211ENST00000498534 ADAMTS1Q9UHI8 967 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 SLCO3A1Q9UIG8 710 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 RAXQ9Y2V3 346 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 ADAMTS20P59510 1910 aa12.44□□□□□ -0.42
CNOT4-211ENST00000498534 FASNP49327 2511 aaKnown RBP12.44□□□□□ -0.42
CNOT4-211ENST00000498534 APC2O95996 2303 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 TBC1D3DA0A087WVF3 549 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 TBC1D3IA0A087WXS9 549 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 TBC1D3EA0A087X179 549 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 TBC1D3KA0A087X1G2 549 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 TBC1D3FA6NER0 549 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-211ENST00000498534 TBC1D3LB9A6J9 549 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 F5H5T6 163 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 PAPSS1O43252 624 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-211ENST00000498534 LETM1O95202 739 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-211ENST00000498534 LDOC1O95751 146 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-211ENST00000498534 IL1BP01584 269 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms