RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 HTATIP2Q9BUP3 242 aa3.66□□□□□ -1.82
PSPC1-205ENST00000497722 MECRQ9BV79 373 aa3.66□□□□□ -1.82
PSPC1-205ENST00000497722 TM2D2Q9BX73 214 aa3.66□□□□□ -1.82
PSPC1-205ENST00000497722 PRDM8Q9NQV8 689 aa3.66□□□□□ -1.82
PSPC1-205ENST00000497722 TMLHEQ9NVH6 421 aa3.66□□□□□ -1.82
PSPC1-205ENST00000497722 ZNF580Q9UK33 172 aa3.66□□□□□ -1.82
PSPC1-205ENST00000497722 DAPP1Q9UN19 280 aa3.66□□□□□ -1.82
PSPC1-205ENST00000497722 PCDHA10Q9Y5I2 948 aa3.66□□□□□ -1.82
PSPC1-205ENST00000497722 PLEKHD1A6NEE1 506 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 MYMKA6NI61 221 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 H0Y3Z8 333 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 DHRS4L1P0CG22 281 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 CYP19A1P11511 503 aaPredicted RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 HOXD12P35452 270 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 STAT6P42226 847 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 RCAN1P53805 252 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 RPL15P61313 204 aaKnown RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 TLE3Q04726 772 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 GOLGA8FQ08AF8 430 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 STIM1Q13586 685 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 INO80DQ53TQ3 878 aaPredicted RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 EARS2Q5JPH6 523 aaKnown RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 JMJD6Q6NYC1 403 aaPredicted RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 SLC39A5Q6ZMH5 540 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 C9orf47Q6ZRZ4 202 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 TFAP2DQ7Z6R9 452 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 ANKRD18AQ8IVF6 992 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 FTSJ3Q8IY81 847 aaKnown RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 SMAP1Q8IYB5 467 aaPredicted RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 TMEM57Q8N5G2 664 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 ZNF548Q8NEK5 533 aaPredicted RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 OTUD7AQ8TE49 926 aaPredicted RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 KCNJ9Q92806 393 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 CELF1Q92879 486 aaKnown RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 TBC1D20Q96BZ9 403 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 FOXP1Q9H334 677 aaPredicted RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 SFXN1Q9H9B4 322 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 CHODLQ9H9P2 273 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 PDE11AQ9HCR9 933 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 RXFP3Q9NSD7 469 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 ZBTB40Q9NUA8 1239 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 SUFUQ9UMX1 484 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 B3GNT3Q9Y2A9 372 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 ZBTB1Q9Y2K1 713 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 RRP7AQ9Y3A4 280 aaKnown RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 LRP12Q9Y561 859 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 TTBK1Q5TCY1 1321 aaPredicted RBP3.65□□□□□ -1.83
PSPC1-205ENST00000497722 EMSYQ7Z589 1322 aa3.65□□□□□ -1.83
PSPC1-205ENST00000497722 MBD3L5A6NJ08 208 aaPredicted RBP3.64□□□□□ -1.83
PSPC1-205ENST00000497722 SLC38A8A6NNN8 435 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 M0QZQ0 153 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 PIP5K1CO60331 668 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 CCNT1O60563 726 aaKnown RBP3.64□□□□□ -1.83
PSPC1-205ENST00000497722 OAZ2O95190 189 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 NFATC1O95644 943 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 ALDOCP09972 364 aaKnown RBP3.64□□□□□ -1.83
PSPC1-205ENST00000497722 SNHG28P0DPA3 235 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 ST6GAL1P15907 406 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 CCKARP32238 428 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 CIITAP33076 1130 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 MAPK9P45984 424 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 CPA2P48052 419 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 PRKAA2P54646 552 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 SLC12A2P55011 1212 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 SLC37A1P57057 533 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 NANOS2P60321 138 aaKnown RBP3.64□□□□□ -1.83
PSPC1-205ENST00000497722 MTX1Q13505 466 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 CUL4BQ13620 913 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 GALNTL6Q49A17 601 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 SLC9C1Q4G0N8 1177 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 HSP90AB4PQ58FF6 505 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 RUNDC3AQ59EK9 446 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 LIPMQ5VYY2 423 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 DGAT2L7PQ6IED9 249 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 LIN54Q6MZP7 749 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 ARFGAP1Q8N6T3 406 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 ANKRD44Q8N8A2 993 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 FAM47BQ8NA70 645 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 MYRIPQ8NFW9 859 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 OR1N1Q8NGS0 311 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 CEP70Q8NHQ1 597 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 NSMCE1Q8WV22 266 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 ASB12Q8WXK4 309 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 RBM17Q96I25 401 aaKnown RBP3.64□□□□□ -1.83
PSPC1-205ENST00000497722 MARK4Q96L34 752 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 FCRL5Q96RD9 977 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 TRMOQ9BU70 441 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 SCNM1Q9BWG6 230 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 OSBPL5Q9H0X9 879 aaPredicted RBP3.64□□□□□ -1.83
PSPC1-205ENST00000497722 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.64□□□□□ -1.83
PSPC1-205ENST00000497722 KCND3Q9UK17 655 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 TNFSF13BQ9Y275 285 aa3.64□□□□□ -1.83
PSPC1-205ENST00000497722 TTC3P53804 2025 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 LOC105369274A0A096LPK9 316 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 LOC102723532A0A0G2JNH3 316 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 GXYLT2A0PJZ3 443 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 FAM90A18PA6NE21 464 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 FAM90A16PA6NEW6 464 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 CD8B2A6NJW9 211 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms