RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 NUB1Q9Y5A7 615 aa13.37□□□□□ -0.27
GAPVD1-220ENST00000497580 NAV1Q8NEY1 1877 aa13.37□□□□□ -0.27
GAPVD1-220ENST00000497580 COL22A1Q8NFW1 1626 aaPredicted RBP13.37□□□□□ -0.27
GAPVD1-220ENST00000497580 RGSL1A5PLK6 1076 aa13.37□□□□□ -0.27
GAPVD1-220ENST00000497580 CHRNGP07510 517 aa13.37□□□□□ -0.27
GAPVD1-220ENST00000497580 KCNJ11Q14654 390 aa13.37□□□□□ -0.27
GAPVD1-220ENST00000497580 ZNF618Q5T7W0 954 aa13.37□□□□□ -0.27
GAPVD1-220ENST00000497580 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.37□□□□□ -0.27
GAPVD1-220ENST00000497580 TUBA8Q9NY65 449 aaPredicted RBP13.37□□□□□ -0.27
GAPVD1-220ENST00000497580 SLC8A2Q9UPR5 921 aa13.37□□□□□ -0.27
GAPVD1-220ENST00000497580 LAMB2P55268 1798 aa13.37□□□□□ -0.27
GAPVD1-220ENST00000497580 PRSS51A0A1B0GVH4 220 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 SLC15A5A6NIM6 579 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 ESRRBO95718 433 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 SPIDRQ14159 915 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 UGCGQ16739 394 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 PIGGQ5H8A4 983 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 SLC39A4Q6P5W5 647 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 LYSMD3Q7Z3D4 306 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 XPNPEP3Q9NQH7 507 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 POU2F3Q9UKI9 436 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 PRR12Q9ULL5 1215 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 CDY2AQ9Y6F7 541 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 CDY1Q9Y6F8 540 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 ROBO1Q9Y6N7 1651 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 WDR27A2RRH5 827 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 APOC4-APOC2K7ER74 178 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 HTRA2O43464 458 aaPredicted RBP13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 GRAP2O75791 330 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 APOC2P02655 101 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 PABPC1P11940 636 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 HOXD11P31277 338 aaPredicted RBP13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 BFSP2Q13515 415 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 LRRC38Q5VT99 294 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 DHRS4L2Q6PKH6 230 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 RNF19BQ6ZMZ0 732 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 CAPSLQ8WWF8 208 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 NSMCE3Q96MG7 304 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 APBA2Q99767 749 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 IMPG2Q9BZV3 1241 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 INO80BQ9C086 356 aaPredicted RBP13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 UNKQ9C0B0 810 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 EHD1Q9H4M9 534 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 SOX17Q9H6I2 414 aaPredicted RBP13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 ZFYVE28Q9HCC9 887 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 ALDOAP04075 364 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 TKTP29401 623 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 NLRP11P59045 1033 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 ZBTB17Q13105 803 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 KCNJ8Q15842 424 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 USP41Q3LFD5 358 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 CCDC153Q494R4 210 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 PITRM1Q5JRX3 1037 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 CAND1Q86VP6 1230 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 TMEM161BQ8NDZ6 487 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 BPIFB6Q8NFQ5 453 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 BSNDQ8WZ55 320 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 VCPIP1Q96JH7 1222 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 CCDC138Q96M89 665 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 CDH19Q9H159 772 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 STN1Q9H668 368 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 UTP6Q9NYH9 597 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 COPG2Q9UBF2 871 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 PSAT1Q9Y617 370 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 PTPRJQ12913 1337 aa13.36□□□□□ -0.27
GAPVD1-220ENST00000497580 BAIAP3O94812 1187 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 BCL10O95999 233 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 TSHRP16473 764 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 S100A1P23297 94 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 GRK2P25098 689 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 GTF2A2P52657 109 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 TPTEP56180 551 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 DNASE1L3Q13609 305 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 RAB39AQ14964 217 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 SF3B4Q15427 424 aaKnown RBP eCLIP13.35□□□□□ -0.275e-12■■■■■ 40
GAPVD1-220ENST00000497580 LSM12Q3MHD2 195 aaKnown RBP13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 RWDD4Q6NW29 188 aaKnown RBP13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 CARM1Q86X55 608 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 KIAA0319LQ8IZA0 1049 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 NETO2Q8NC67 525 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 FAM96AQ9H5X1 160 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 WARS2Q9UGM6 360 aaKnown RBP13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 NOX1Q9Y5S8 564 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 TOR1BO14657 336 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 CSDE1O75534 798 aaKnown RBP13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 MYL4P12829 197 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 ACO1P21399 889 aaKnown RBP13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 MIPP30301 263 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 PGGT1BP53609 377 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 CDK18Q07002 472 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 GK5Q6ZS86 529 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 FAM110BQ8TC76 370 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 ACER1Q8TDN7 264 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 C3orf70A6NLC5 250 aaPredicted RBP13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 NRP1O14786 923 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 AQP9O43315 295 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 GSRP00390 522 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 HDCP19113 662 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 EPHX2P34913 555 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms