RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 ADAMTS19Q8TE59 1207 aa11.34□□□□□ -0.59
PKP4-215ENST00000494945 HNRNPLLQ8WVV9 542 aaKnown RBP11.34□□□□□ -0.59
PKP4-215ENST00000494945 HDAC11Q96DB2 347 aa11.34□□□□□ -0.59
PKP4-215ENST00000494945 TCEAL4Q96EI5 215 aa11.34□□□□□ -0.59
PKP4-215ENST00000494945 SNF8Q96H20 258 aa11.34□□□□□ -0.59
PKP4-215ENST00000494945 RPRD1AQ96P16 312 aaPredicted RBP11.34□□□□□ -0.59
PKP4-215ENST00000494945 FERMT1Q9BQL6 677 aa11.34□□□□□ -0.59
PKP4-215ENST00000494945 KLC2Q9H0B6 622 aa11.34□□□□□ -0.59
PKP4-215ENST00000494945 DPH5Q9H2P9 285 aa11.34□□□□□ -0.59
PKP4-215ENST00000494945 USP29Q9HBJ7 922 aa11.34□□□□□ -0.59
PKP4-215ENST00000494945 SMPD4Q9NXE4 827 aa11.34□□□□□ -0.59
PKP4-215ENST00000494945 WHRNQ9P202 907 aa11.34□□□□□ -0.59
PKP4-215ENST00000494945 AGO1Q9UL18 857 aaKnown RBP11.34□□□□□ -0.59
PKP4-215ENST00000494945 MYLKQ15746 1914 aa11.34□□□□□ -0.59
PKP4-215ENST00000494945 GOLGA6L7A0A1B0GV03 622 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 ESYT3A0FGR9 886 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 NRG2O14511 850 aaPredicted RBP11.33□□□□□ -0.6
PKP4-215ENST00000494945 KCNN4O15554 427 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 MTSS1O43312 755 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 GREM1O60565 184 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 MAP3K6O95382 1288 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 TCF3P15923 654 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 ITIH2P19823 946 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 RBL1P28749 1068 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 WEE1P30291 646 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 SLC6A4P31645 630 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 ACTN2P35609 894 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 ADCY8P40145 1251 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 RPL21P46778 160 aaKnown RBP11.33□□□□□ -0.6
PKP4-215ENST00000494945 MAPKAPK2P49137 400 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 CARSP49589 748 aaKnown RBP11.33□□□□□ -0.6
PKP4-215ENST00000494945 NDST2P52849 883 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 RBM10P98175 930 aaKnown RBP11.33□□□□□ -0.6
PKP4-215ENST00000494945 CAV1Q03135 178 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 PPIDQ08752 370 aaKnown RBP11.33□□□□□ -0.6
PKP4-215ENST00000494945 HYAL1Q12794 435 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 CALCOCO2Q13137 446 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 P3H1Q32P28 736 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 TCEAL5Q5H9L2 206 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 AFMIDQ63HM1 303 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 HEATR6Q6AI08 1181 aaKnown RBP11.33□□□□□ -0.6
PKP4-215ENST00000494945 HTR3DQ70Z44 454 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 CPXM2Q8N436 756 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 C12orf76Q8N812 135 aaPredicted RBP11.33□□□□□ -0.6
PKP4-215ENST00000494945 FAM71DQ8N9W8 422 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 IFT81Q8WYA0 676 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 IGSF8Q969P0 613 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 LRRC45Q96CN5 670 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 HINFPQ9BQA5 517 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 TRIM31Q9BZY9 425 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 PRDM12Q9H4Q4 367 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 IGFLR1Q9H665 355 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 MPP6Q9NZW5 540 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 SNX24Q9Y343 169 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 MRPS23Q9Y3D9 190 aaKnown RBP11.33□□□□□ -0.6
PKP4-215ENST00000494945 SH3BP1Q9Y3L3 701 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 TRIOBPQ9H2D6 2365 aa11.33□□□□□ -0.6
PKP4-215ENST00000494945 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.32□□□□□ -0.6
PKP4-215ENST00000494945 E2F8A0AVK6 867 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 LEFTY2O00292 366 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 CLDN11O75508 207 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 CNTN5O94779 1100 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 STK10O94804 968 aaKnown RBP11.32□□□□□ -0.6
PKP4-215ENST00000494945 SEC31AO94979 1220 aaKnown RBP11.32□□□□□ -0.6
PKP4-215ENST00000494945 GLP2RO95838 553 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 IFNB1P01574 187 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 HOXB8P17481 243 aaPredicted RBP11.32□□□□□ -0.6
PKP4-215ENST00000494945 CEBPBP17676 345 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 IVDP26440 423 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 GARSP41250 739 aaKnown RBP11.32□□□□□ -0.6
PKP4-215ENST00000494945 GDF10P55107 478 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 CDH4P55283 916 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 YBEYP58557 167 aaPredicted RBP11.32□□□□□ -0.6
PKP4-215ENST00000494945 NTHL1P78549 312 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 ZXDBP98169 803 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 AP1B1Q10567 949 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 HLTFQ14527 1009 aaKnown RBP eCLIP11.32□□□□□ -0.6
PKP4-215ENST00000494945 TRIP13Q15645 432 aaPredicted RBP11.32□□□□□ -0.6
PKP4-215ENST00000494945 ALFQ53S48 1182 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 RARS2Q5T160 578 aaKnown RBP11.32□□□□□ -0.6
PKP4-215ENST00000494945 ANKRD54Q6NXT1 300 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 EMBQ6PCB8 327 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 RFWD3Q6PCD5 774 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 FBXO38Q6PIJ6 1188 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 TMC5Q6UXY8 1006 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 CHST9Q7L1S5 443 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 PCGF5Q86SE9 256 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 GPR149Q86SP6 731 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 ARHGAP12Q8IWW6 846 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 KIAA1958Q8N8K9 716 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 GLIS1Q8NBF1 620 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 HJURPQ8NCD3 748 aaPredicted RBP11.32□□□□□ -0.6
PKP4-215ENST00000494945 CCNYQ8ND76 341 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 HTR3CQ8WXA8 447 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 WBP2Q969T9 261 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 TSGA13Q96PP4 275 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 LGMNQ99538 433 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 C10orf88Q9H8K7 445 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 TDP1Q9NUW8 608 aa11.32□□□□□ -0.6
PKP4-215ENST00000494945 GRHL1Q9NZI5 618 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms