RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 CEP170P1Q96L14 293 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 PITPNM3Q9BZ71 974 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 CCDC113Q9H0I3 377 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 DCLRE1BQ9H816 532 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 XPNPEP1Q9NQW7 623 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 SEPT11Q9NVA2 429 aaKnown RBP10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 EBF1Q9UH73 591 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 ASIC3Q9UHC3 531 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 EVLQ9UI08 416 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 KCNG1Q9UIX4 513 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 SLC8A2Q9UPR5 921 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 DENND4CQ5VZ89 1909 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 ARHGEF35A5YM69 484 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 TK2O00142 265 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 KRT16P08779 473 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 PYGMP11217 842 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 IVDP26440 423 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 PTPN7P35236 360 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 RFC5P40937 340 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 IFNAR2P48551 515 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 PSMC5P62195 406 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 KCNJ2P63252 427 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 SIM1P81133 766 aaPredicted RBP10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 ROR1Q01973 937 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 GCNT1Q02742 428 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 ZNF211Q13398 564 aaPredicted RBP10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 MESDQ14696 234 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 EMC2Q15006 297 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 FYB2Q5VWT5 728 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 FAM91A1Q658Y4 838 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 PMS2CLQ68D20 193 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 SLC27A1Q6PCB7 646 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 GPIHBP1Q8IV16 184 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 YAF2Q8IY57 180 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 ARHGAP24Q8N264 748 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 ASAP3Q8TDY4 903 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 PIGOQ8TEQ8 1089 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 ZFAND2BQ8WV99 257 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 KRT35Q92764 455 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 ZNF653Q96CK0 615 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 DDX27Q96GQ7 796 aaKnown RBP10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 NAF1Q96HR8 494 aaKnown RBP10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 ZNF570Q96NI8 536 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 LRRC37BQ96QE4 947 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 NUP85Q9BW27 656 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 DCLK3Q9C098 648 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 VCXQ9H320 206 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 MRPL47Q9HD33 250 aaKnown RBP10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 UBE2TQ9NPD8 197 aaPredicted RBP10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 RGL1Q9NZL6 768 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 ADAM22Q9P0K1 906 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 ZFATQ9P243 1243 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 STOML1Q9UBI4 398 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 ANAPC5Q9UJX4 755 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 INSL5Q9Y5Q6 135 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 CEP192Q8TEP8 1941 aa10.97□□□□□ -0.65
PDLIM1-205ENST00000493949 ZNF638Q14966 1978 aaKnown RBP10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 ANK1P16157 1881 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 SPAARA0A1B0GVQ0 90 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 INO80B-WBP1J3KQ70 363 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 DIAPH2O60879 1101 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 SLITRK3O94933 977 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 ASMTLO95671 621 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 THP07101 528 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 GNAZP19086 355 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 TAC1P20366 129 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 IRX4P78413 519 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 GTF2BQ00403 316 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 MBTD1Q05BQ5 628 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 MCL1Q07820 350 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 LMAN2Q12907 356 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 CBLBQ13191 982 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 SEMA3BQ13214 749 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 RBBP5Q15291 538 aaKnown RBP10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 TAF11Q15544 211 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 ZNF423Q2M1K9 1284 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 ACCSLQ4AC99 568 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 TMEM196Q5HYL7 178 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 KRT39Q6A163 491 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 IRGCQ6NXR0 463 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 PCGF5Q86SE9 256 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 NOP9Q86U38 636 aaKnown RBP10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 C11orf74Q86VG3 221 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 VSIG1Q86XK7 387 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 KATNAL2Q8IYT4 538 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 CHCHD4Q8N4Q1 142 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 FITM2Q8N6M3 262 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 KCNN1Q92952 543 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 SPDL1Q96EA4 605 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 TMEM209Q96SK2 561 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 NFKBIZQ9BYH8 718 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 CCDC86Q9H6F5 360 aaKnown RBP10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 C17orf75Q9HAS0 396 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 TMEM8AQ9HCN3 771 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 KCNK9Q9NPC2 374 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 IGSF5Q9NSI5 407 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 OBP2AQ9NY56 170 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 GTSE1Q9NYZ3 720 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 NINJ2Q9NZG7 142 aa10.96□□□□□ -0.65
PDLIM1-205ENST00000493949 SHOC2Q9UQ13 582 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms