RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.92□□□□□ -0.82
VPS8-225ENST00000492449 ZMAT5Q9UDW3 170 aaKnown RBP9.92□□□□□ -0.82
VPS8-225ENST00000492449 USP17L3A6NCW0 530 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 USP17L4A6NCW7 530 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 ZSCAN5BA6NJL1 495 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 NOP56O00567 594 aaKnown RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 TRDMT1O14717 391 aaKnown RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 ASNA1O43681 348 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 MARCH6O60337 910 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 GABBR2O75899 941 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 POLR2CP19387 275 aaPredicted RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 NCF2P19878 526 aaPredicted RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 KCNA4P22459 653 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 SLC7A1P30825 629 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 HLCSP50747 726 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 PPP2R2BQ00005 443 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 PERM1Q5SV97 790 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 GTF2IRD2BQ6EKJ0 949 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 KIAA0408Q6ZU52 694 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 USP17L1Q7RTZ2 530 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 ADAMTSL2Q86TH1 951 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 GTF2IRD2Q86UP8 949 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 IGDCC3Q8IVU1 814 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 HACE1Q8IYU2 909 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 CLIP4Q8N3C7 705 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 ASCC1Q8N9N2 400 aaKnown RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 TOR1AIP2Q8NFQ8 470 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 NSUN4Q96CB9 384 aaKnown RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 LENG8Q96PV6 779 aaPredicted RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 FIZ1Q96SL8 496 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 C2orf49Q9BVC5 232 aaPredicted RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 EMILIN2Q9BXX0 1053 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 RUBCNLQ9H714 662 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 PCDH12Q9NPG4 1184 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 MRPL40Q9NQ50 206 aaKnown RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 C8orf4Q9NR00 106 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 HACD3Q9P035 362 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 PKD2L1Q9P0L9 805 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 TCRBV3S1A0A5B6 114 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 TRIM38O00635 465 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 TADA2AO75478 443 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 LYPLA1O75608 230 aaPredicted RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 TMEM63AO94886 807 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 CD58P19256 250 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 ELK3P41970 407 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 NOVP48745 357 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 TNNI2P48788 182 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 TRAP1Q12931 704 aaKnown RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 PPIL2Q13356 520 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 COG2Q14746 738 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 PGS1Q32NB8 556 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 DDX60LQ5H9U9 1706 aaKnown RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 LRRC38Q5VT99 294 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 IQSEC1Q6DN90 963 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 HMBOX1Q6NT76 420 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 MOXD1Q6UVY6 613 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 TMC5Q6UXY8 1006 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 RNF19BQ6ZMZ0 732 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 IDO2Q6ZQW0 420 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 ZCCHC23Q6ZST2 131 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 HERC6Q8IVU3 1022 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 MFSD4AQ8N468 514 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 LRTOMTQ8WZ04 291 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 PEX13Q92968 403 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 KAT5Q92993 513 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 ATP6V1E2Q96A05 226 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 DCPSQ96C86 337 aaKnown RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 CDK5RAP1Q96SZ6 601 aaKnown RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 AIFM2Q9BRQ8 373 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.91□□□□□ -0.82
VPS8-225ENST00000492449 SMOXQ9NWM0 555 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 XPO7Q9UIA9 1087 aaKnown RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 ZNRF3Q9ULT6 936 aa9.91□□□□□ -0.82
VPS8-225ENST00000492449 ATF5Q9Y2D1 282 aaPredicted RBP9.91□□□□□ -0.82
VPS8-225ENST00000492449 FOCADQ5VW36 1801 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 ISPDA4D126 451 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 EVPLLA8MZ36 301 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 KBTBD13C9JR72 458 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 SGK1O00141 431 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 TSPAN1O60635 241 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 TSPY3P0CV98 308 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 TSPY8P0CW00 308 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 RPL10P27635 214 aaKnown RBP9.9□□□□□ -0.82
VPS8-225ENST00000492449 PIK3R1P27986 724 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 SERPINB1P30740 379 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 GRIK1P39086 918 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 ECT2LQ008S8 904 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 BBS9Q3SYG4 887 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 AASDHQ4L235 1098 aaPredicted RBP9.9□□□□□ -0.82
VPS8-225ENST00000492449 MTX3Q5HYI7 312 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 STXBP4Q6ZWJ1 553 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 CMASQ8NFW8 434 aaPredicted RBP9.9□□□□□ -0.82
VPS8-225ENST00000492449 AFG1LQ8WV93 481 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 OSCP1Q8WVF1 389 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 SLCO4A1Q96BD0 722 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 CPVLQ9H3G5 476 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.9□□□□□ -0.82
VPS8-225ENST00000492449 SLC27A5Q9Y2P5 690 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 MN1Q10571 1320 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms