RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 PBXIP1Q96AQ6 731 aa16.3■□□□□ 0.2
TRA2A-208ENST00000490942 DHX35Q9H5Z1 703 aaKnown RBP16.3■□□□□ 0.2
TRA2A-208ENST00000490942 ZWILCHQ9H900 591 aa16.3■□□□□ 0.2
TRA2A-208ENST00000490942 FBRSL1Q9HCM7 1045 aaKnown RBP16.3■□□□□ 0.2
TRA2A-208ENST00000490942 SALL4Q9UJQ4 1053 aa16.3■□□□□ 0.2
TRA2A-208ENST00000490942 ALG6Q9Y672 507 aa16.3■□□□□ 0.2
TRA2A-208ENST00000490942 KIAA1549LQ6ZVL6 1849 aa16.3■□□□□ 0.2
TRA2A-208ENST00000490942 MUC3AQ02505 3323 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 A0A0C4DFX4 3053 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 ILVBLA1L0T0 632 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 TBC1D3BA6NDS4 549 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 CHURC1-FNTBB4DL54 471 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 FAM72CH0Y354 149 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 H3BRJ5 948 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 MOCS3O95396 460 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 PABPC1P11940 636 aaKnown RBP16.29■□□□□ 0.2
TRA2A-208ENST00000490942 TCF4P15884 667 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 CD72P21854 359 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 COMTP21964 271 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 EPHB2P29323 1055 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 ETFBP38117 255 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 TAS2R40P59535 323 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 TPI1P60174 286 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 ALFQ53S48 1182 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 FAM72AQ5TYM5 149 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 FAM72DQ6L9T8 149 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 CXorf57Q6NSI4 855 aaKnown RBP16.29■□□□□ 0.2
TRA2A-208ENST00000490942 NLRP14Q86W24 1093 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 FAM72BQ86X60 149 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 CARNMT1Q8N4J0 409 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 RTL3Q8N8U3 475 aaKnown RBP16.29■□□□□ 0.2
TRA2A-208ENST00000490942 LRRC57Q8N9N7 239 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 KDM1BQ8NB78 822 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 FLCNQ8NFG4 579 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 KIAA1524Q8TCG1 905 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 UCMAQ8WVF2 138 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 FOXQ1Q9C009 403 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 CHRDQ9H2X0 955 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 PRDM16Q9HAZ2 1276 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRA2A-208ENST00000490942 DDX56Q9NY93 547 aaKnown RBP16.29■□□□□ 0.2
TRA2A-208ENST00000490942 GGA2Q9UJY4 613 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 CLEC4EQ9ULY5 219 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 TFR2Q9UP52 801 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 PPP2R2CQ9Y2T4 447 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRA2A-208ENST00000490942 DUSP10Q9Y6W6 482 aa16.29■□□□□ 0.2
TRA2A-208ENST00000490942 MYOFQ9NZM1 2061 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 K7EQS6 105 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 EEF2KO00418 725 aaKnown RBP16.28■□□□□ 0.2
TRA2A-208ENST00000490942 DLL1O00548 723 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 ZSCAN12O43309 604 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 SPOPO43791 374 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 ATG13O75143 517 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 EGFP01133 1207 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 ASLP04424 464 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 GGCXP38435 758 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 ARL4AP40617 200 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 SSR1P43307 286 aaKnown RBP16.28■□□□□ 0.2
TRA2A-208ENST00000490942 VASPP50552 380 aaPredicted RBP16.28■□□□□ 0.2
TRA2A-208ENST00000490942 ARSEP51690 589 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 NAP1L1P55209 391 aaKnown RBP16.28■□□□□ 0.2
TRA2A-208ENST00000490942 SULT2A1Q06520 285 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 CA9Q16790 459 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 KCNT1Q5JUK3 1230 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 TMEM31Q5JXX7 168 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 DAB2IPQ5VWQ8 1189 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 RWDD4Q6NW29 188 aaKnown RBP16.28■□□□□ 0.2
TRA2A-208ENST00000490942 RFX8Q6ZV50 586 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 TRMT11Q7Z4G4 463 aaKnown RBP16.28■□□□□ 0.2
TRA2A-208ENST00000490942 DAAM2Q86T65 1068 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 PYROXD2Q8N2H3 581 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 TSC1Q92574 1164 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 EZH1Q92800 747 aaPredicted RBP16.28■□□□□ 0.2
TRA2A-208ENST00000490942 TTC17Q96AE7 1141 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 KCTD15Q96SI1 283 aaPredicted RBP16.28■□□□□ 0.2
TRA2A-208ENST00000490942 ZNF670Q9BS34 389 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 KCNF1Q9H3M0 494 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 LMAN1LQ9HAT1 526 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 C11orf16Q9NQ32 467 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 ABCB8Q9NUT2 735 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 DLGAP2Q9P1A6 1054 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 NDRG2Q9UN36 371 aaKnown RBP16.28■□□□□ 0.2
TRA2A-208ENST00000490942 SNX10Q9Y5X0 201 aa16.28■□□□□ 0.2
TRA2A-208ENST00000490942 TMEM110-MUSTN1A8MSY1 372 aa16.27■□□□□ 0.2
TRA2A-208ENST00000490942 STK25O00506 426 aa16.27■□□□□ 0.2
TRA2A-208ENST00000490942 BUB1O43683 1085 aa16.27■□□□□ 0.2
TRA2A-208ENST00000490942 CREB3O43889 395 aa16.27■□□□□ 0.2
TRA2A-208ENST00000490942 CNTN5O94779 1100 aa16.27■□□□□ 0.2
TRA2A-208ENST00000490942 PDGFBP01127 241 aaPredicted RBP16.27■□□□□ 0.2
TRA2A-208ENST00000490942 ATP5BP06576 529 aaKnown RBP16.27■□□□□ 0.2
TRA2A-208ENST00000490942 CHRM1P11229 460 aaPredicted RBP16.27■□□□□ 0.2
TRA2A-208ENST00000490942 HNRNPLP14866 589 aaKnown RBP eCLIP16.27■□□□□ 0.2
TRA2A-208ENST00000490942 OR1E1P30953 314 aa16.27■□□□□ 0.2
TRA2A-208ENST00000490942 KIR2DL1P43626 348 aaPredicted RBP16.27■□□□□ 0.2
TRA2A-208ENST00000490942 IRAK1P51617 712 aa16.27■□□□□ 0.2
TRA2A-208ENST00000490942 YBEYP58557 167 aaPredicted RBP16.27■□□□□ 0.2
TRA2A-208ENST00000490942 KDSRQ06136 332 aa16.27■□□□□ 0.2
TRA2A-208ENST00000490942 LMAN2Q12907 356 aa16.27■□□□□ 0.2
TRA2A-208ENST00000490942 GEN1Q17RS7 908 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms