RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 PTPRNQ16849 979 aa24.42■■□□□ 1.5
RHBDD3-205ENST00000488106 PLK5Q496M5 336 aa24.42■■□□□ 1.5
RHBDD3-205ENST00000488106 SH3PXD2AQ5TCZ1 1133 aa24.42■■□□□ 1.5
RHBDD3-205ENST00000488106 CACUL1Q86Y37 369 aa24.42■■□□□ 1.5
RHBDD3-205ENST00000488106 DNAAF5Q86Y56 855 aa24.42■■□□□ 1.5
RHBDD3-205ENST00000488106 KIAA2013Q8IYS2 634 aa24.42■■□□□ 1.5
RHBDD3-205ENST00000488106 FRMD1Q8N878 549 aa24.42■■□□□ 1.5
RHBDD3-205ENST00000488106 MCEEQ96PE7 176 aa24.42■■□□□ 1.5
RHBDD3-205ENST00000488106 MOCS3O95396 460 aa24.41■■□□□ 1.5
RHBDD3-205ENST00000488106 RETP07949 1114 aa24.41■■□□□ 1.5
RHBDD3-205ENST00000488106 P2RY2P41231 377 aa24.41■■□□□ 1.5
RHBDD3-205ENST00000488106 PTPN9P43378 593 aa24.41■■□□□ 1.5
RHBDD3-205ENST00000488106 SPEM2Q0P670 501 aa24.41■■□□□ 1.5
RHBDD3-205ENST00000488106 ELF2Q15723 593 aa24.41■■□□□ 1.5
RHBDD3-205ENST00000488106 APCDD1Q8J025 514 aa24.41■■□□□ 1.5
RHBDD3-205ENST00000488106 FAM172AQ8WUF8 416 aa24.41■■□□□ 1.5
RHBDD3-205ENST00000488106 MRGPRX1Q96LB2 322 aa24.41■■□□□ 1.5
RHBDD3-205ENST00000488106 DUSP15Q9H1R2 295 aaPredicted RBP24.41■■□□□ 1.5
RHBDD3-205ENST00000488106 TCRBV5S1A1TA0A578 114 aa24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 ANKRD62A6NC57 917 aa24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 GYPCP04921 128 aa24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 CTSOP43234 321 aaPredicted RBP24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 PLEKHG6Q3KR16 790 aa24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 CXorf57Q6NSI4 855 aaKnown RBP24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 PPP1R2P3Q6NXS1 205 aa24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 WDR59Q6PJI9 974 aa24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 TTC17Q96AE7 1141 aa24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 ZC3H10Q96K80 434 aaKnown RBP24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 CD93Q9NPY3 652 aa24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 TMEM51Q9NW97 253 aa24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 USP18Q9UMW8 372 aa24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 TP53BP1Q12888 1972 aaPredicted RBP24.4■■□□□ 1.5
RHBDD3-205ENST00000488106 ITIH6Q6UXX5 1313 aa24.39■■□□□ 1.5
RHBDD3-205ENST00000488106 SIGLEC16A6NMB1 481 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 DDX3XO00571 662 aaKnown RBP eCLIP24.39■■□□□ 1.491e-9■■■■□ 20.5
RHBDD3-205ENST00000488106 CBFA2T2O43439 604 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 CNTN5O94779 1100 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 ENDOD1O94919 500 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 ASLP04424 464 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 MZF1P28698 734 aaPredicted RBP24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 ST8SIA6P61647 398 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 RPL7AP62424 266 aaKnown RBP24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 ZBED6P86452 979 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 MAP7D1Q3KQU3 841 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 DCUN1D2Q6PH85 259 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 LRRC31Q6UY01 552 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 STRADAQ7RTN6 431 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 C11orf74Q86VG3 221 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 IQCDQ96DY2 449 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 MKRN2Q9H000 416 aaKnown RBP24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 TMEM245Q9H330 911 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 PARD6AQ9NPB6 346 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 CAPN11Q9UMQ6 739 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 CYP8B1Q9UNU6 501 aa24.39■■□□□ 1.49
RHBDD3-205ENST00000488106 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 E9PAM4 449 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 MAP3K13O43283 966 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 CCP110O43303 1012 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 SRGAP2O75044 1071 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 CLDN11O75508 207 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 RHOBTB1O94844 696 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 EPN2O95208 641 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 HDAC4P56524 1084 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 ZNF177Q13360 481 aaPredicted RBP24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 BYSLQ13895 437 aaKnown RBP24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 CCDC6Q16204 474 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 C5orf22Q49AR2 442 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 ALFQ53S48 1182 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 PPP1R15BQ5SWA1 713 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 HGSNATQ68CP4 663 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 PMS2CLQ68D20 193 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 ZNF683Q8IZ20 524 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 ARRDC1-AS1Q9H2J1 176 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 PRDM16Q9HAZ2 1276 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 MPP6Q9NZW5 540 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 MBD1Q9UIS9 605 aaPredicted RBP24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 ERVW-1Q9UQF0 538 aa24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 LUC7L2Q9Y383 392 aaKnown RBP24.38■■□□□ 1.49
RHBDD3-205ENST00000488106 CASP14P31944 242 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 COPAP53621 1224 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 CDH4P55283 916 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 ARL13BQ3SXY8 428 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 RNF219Q5W0B1 726 aaPredicted RBP24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 TFAP2DQ7Z6R9 452 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 CCDC185Q8N715 623 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 OR52K2Q8NGK3 314 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 CENPIQ92674 756 aaPredicted RBP24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 SYN2Q92777 582 aaPredicted RBP24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 MYO19Q96H55 970 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 VCPIP1Q96JH7 1222 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 MRGPRX3Q96LB0 322 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 C1orf74Q96LT6 269 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 HAPLN3Q96S86 360 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 MTG2Q9H4K7 406 aa24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.37■■□□□ 1.49
RHBDD3-205ENST00000488106 RTN2O75298 545 aa24.36■■□□□ 1.49
RHBDD3-205ENST00000488106 FTLP02792 175 aaPredicted RBP24.36■■□□□ 1.49
RHBDD3-205ENST00000488106 RHOCP08134 193 aa24.36■■□□□ 1.49
RHBDD3-205ENST00000488106 PLEKP08567 350 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms