RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 IL18RAPO95256 599 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 PABPC1P11940 636 aaKnown RBP6.09□□□□□ -1.43
COL4A3-206ENST00000487633 LIFP15018 202 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 XBP1P17861 261 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 DDIT3P35638 169 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 PLA2G4AP47712 749 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 INHBCP55103 352 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 EFEMP1Q12805 493 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 C1orf61Q13536 156 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 MCM6Q14566 821 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 EIF4HQ15056 248 aaKnown RBP6.09□□□□□ -1.43
COL4A3-206ENST00000487633 TCEA2Q15560 299 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 FSCBQ5H9T9 825 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 C10orf120Q5SQS8 335 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 GCNT7Q6ZNI0 430 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 RAB11FIP2Q7L804 512 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 DPH6Q7L8W6 267 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 GPBP1Q86WP2 473 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 NT5DC4Q86YG4 428 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 SLC35F3Q8IY50 421 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 RBFAQ8N0V3 343 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 OXR1Q8N573 874 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 C12orf29Q8N999 325 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 ZNF548Q8NEK5 533 aaPredicted RBP6.09□□□□□ -1.43
COL4A3-206ENST00000487633 C9orf43Q8TAL5 461 aaPredicted RBP6.09□□□□□ -1.43
COL4A3-206ENST00000487633 ZNF516Q92618 1163 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 PTPRN2Q92932 1015 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 USP7Q93009 1102 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 HPS3Q969F9 1004 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 FAM131CQ96AQ9 280 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 SKA1Q96BD8 255 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 KLHDC7BQ96G42 594 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 OMDQ99983 421 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 CCDC3Q9BQI4 270 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 STRA6Q9BX79 667 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 CALN1Q9BXU9 219 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 ZHX3Q9H4I2 956 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 CASS4Q9NQ75 786 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 INTS13Q9NVM9 706 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 KLHL11Q9NVR0 708 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 RBAKQ9NYW8 714 aaPredicted RBP6.09□□□□□ -1.43
COL4A3-206ENST00000487633 EHD2Q9NZN4 543 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 TBC1D7Q9P0N9 293 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 LARSQ9P2J5 1176 aaKnown RBP6.09□□□□□ -1.43
COL4A3-206ENST00000487633 GGA2Q9UJY4 613 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 NCKAP1Q9Y2A7 1128 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 KIF3AQ9Y496 699 aa6.09□□□□□ -1.43
COL4A3-206ENST00000487633 SPG11Q96JI7 2443 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 A8MXQ7 604 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 RAD51BO15315 384 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 TACC1O75410 805 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 LDLRP01130 860 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 DLDP09622 509 aaKnown RBP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 GOT1P17174 413 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 OAS2P29728 719 aaKnown RBP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 SLC6A4P31645 630 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 STK19P49842 368 aaPredicted RBP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 MYL6P60660 151 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 IRX6P78412 446 aaPredicted RBP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 CCL7P80098 99 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 ARID5AQ03989 594 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 FGL2Q14314 439 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 FZD2Q14332 565 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 STAT4Q14765 748 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 MAPRE1Q15691 268 aaKnown RBP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 HNRNPA1L2Q32P51 320 aaKnown RBP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 AGBL4Q5VU57 503 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 KRT79Q5XKE5 535 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 RFWD3Q6PCD5 774 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 CPLX2Q6PUV4 134 aaKnown RBP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 CLEC20AQ6ZU45 233 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 SND1Q7KZF4 910 aaKnown RBP eCLIP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 ZNF720Q7Z2F6 126 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 ACOT1Q86TX2 421 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 SFR1Q86XK3 245 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 CBWD2Q8IUF1 395 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 RDH13Q8NBN7 331 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 SLC2A14Q8TDB8 520 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 NKD1Q969G9 470 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 FUBP1Q96AE4 644 aaKnown RBP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 RNF31Q96EP0 1072 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 RPL10LQ96L21 214 aaKnown RBP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 BMFQ96LC9 184 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 TWNKQ96RR1 684 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 MED10Q9BTT4 135 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 TIPINQ9BVW5 301 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 XYLT2Q9H1B5 865 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 SNX25Q9H3E2 840 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 CSNK1G1Q9HCP0 422 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 DMAP1Q9NPF5 467 aaPredicted RBP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 TLR8Q9NR97 1041 aaKnown RBP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 PDRG1Q9NUG6 133 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 FAM49BQ9NUQ9 324 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 DONSONQ9NYP3 566 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 FZD4Q9ULV1 537 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 ZFR2Q9UPR6 939 aaKnown RBP6.08□□□□□ -1.44
COL4A3-206ENST00000487633 LOXL2Q9Y4K0 774 aa6.08□□□□□ -1.44
COL4A3-206ENST00000487633 DCHS2Q6V1P9 2916 aa6.07□□□□□ -1.44
COL4A3-206ENST00000487633 ARHGEF17Q96PE2 2063 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms