RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 ARHGEF38Q9NXL2 777 aa21.09■□□□□ 0.97
HDAC4-209ENST00000487617 PAXBP1Q9Y5B6 917 aa21.09■□□□□ 0.97
HDAC4-209ENST00000487617 SYCE3A1L190 88 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 DCDC2BA2VCK2 349 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 PDGFRAP16234 1089 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 PLEKHG6Q3KR16 790 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 STPG1Q5TH74 334 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 TRNP1Q6NT89 227 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 C14orf80Q86SX3 495 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 SLC41A1Q8IVJ1 513 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 APCDD1Q8J025 514 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 MYO19Q96H55 970 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 MRGPRX3Q96LB0 322 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 HSPA12BQ96MM6 686 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 CFAP57Q96MR6 1250 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 EDEM2Q9BV94 578 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 MTG2Q9H4K7 406 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 FBRSQ9HAH7 460 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 TMEM74BQ9NUR3 256 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 PILRBQ9UKJ0 227 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 ERVW-1Q9UQF0 538 aa21.08■□□□□ 0.97
HDAC4-209ENST00000487617 DMXL1Q9Y485 3027 aa21.08■□□□□ 0.96
HDAC4-209ENST00000487617 UNGP13051 313 aaPredicted RBP21.07■□□□□ 0.96
HDAC4-209ENST00000487617 OXTRP30559 389 aa21.07■□□□□ 0.96
HDAC4-209ENST00000487617 CTSOP43234 321 aaPredicted RBP21.07■□□□□ 0.96
HDAC4-209ENST00000487617 NSFP46459 744 aaKnown RBP21.07■□□□□ 0.96
HDAC4-209ENST00000487617 IRAK1P51617 712 aa21.07■□□□□ 0.96
HDAC4-209ENST00000487617 OXCT1P55809 520 aa21.07■□□□□ 0.96
HDAC4-209ENST00000487617 ECT2LQ008S8 904 aa21.07■□□□□ 0.96
HDAC4-209ENST00000487617 FOXK2Q01167 660 aa21.07■□□□□ 0.96
HDAC4-209ENST00000487617 SLC12A1Q13621 1099 aa21.07■□□□□ 0.96
HDAC4-209ENST00000487617 CLEC16AQ2KHT3 1053 aa21.07■□□□□ 0.96
HDAC4-209ENST00000487617 TRIM61Q5EBN2 209 aa21.07■□□□□ 0.96
HDAC4-209ENST00000487617 RNF219Q5W0B1 726 aaPredicted RBP21.07■□□□□ 0.96
HDAC4-209ENST00000487617 IL31Q6EBC2 164 aa21.07■□□□□ 0.96
HDAC4-209ENST00000487617 ARCQ7LC44 396 aa21.07■□□□□ 0.96
HDAC4-209ENST00000487617 EMC1Q8N766 993 aa21.07■□□□□ 0.96
HDAC4-209ENST00000487617 ANLNQ9NQW6 1124 aa21.07■□□□□ 0.96
HDAC4-209ENST00000487617 WSB2Q9NYS7 404 aaPredicted RBP21.07■□□□□ 0.96
HDAC4-209ENST00000487617 PLXND1Q9Y4D7 1925 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.06■□□□□ 0.96
HDAC4-209ENST00000487617 LNP1A1A4G5 178 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 SRPRAP08240 638 aaKnown RBP21.06■□□□□ 0.96
HDAC4-209ENST00000487617 CCDC172P0C7W6 258 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 FERP16591 822 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 MZF1P28698 734 aaPredicted RBP21.06■□□□□ 0.96
HDAC4-209ENST00000487617 RDXP35241 583 aaKnown RBP21.06■□□□□ 0.96
HDAC4-209ENST00000487617 NUMBP49757 651 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 IRX4P78413 519 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 ZNF177Q13360 481 aaPredicted RBP21.06■□□□□ 0.96
HDAC4-209ENST00000487617 IQCB1Q15051 598 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 CXorf57Q6NSI4 855 aaKnown RBP21.06■□□□□ 0.96
HDAC4-209ENST00000487617 KDM1BQ8NB78 822 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 FOXJ1Q92949 421 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 ZNF419Q96HQ0 510 aaPredicted RBP21.06■□□□□ 0.96
HDAC4-209ENST00000487617 AGPAT1Q99943 283 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 NUP58Q9BVL2 599 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 GPR174Q9BXC1 333 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 NUSAP1Q9BXS6 441 aaKnown RBP21.06■□□□□ 0.96
HDAC4-209ENST00000487617 EVLQ9UI08 416 aaPredicted RBP21.06■□□□□ 0.96
HDAC4-209ENST00000487617 SNX10Q9Y5X0 201 aa21.06■□□□□ 0.96
HDAC4-209ENST00000487617 I6L893 689 aaPredicted RBP21.05■□□□□ 0.96
HDAC4-209ENST00000487617 CLDN11O75508 207 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 IGLV3-19P01714 112 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 PTMSP20962 102 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 HOXD12P35452 270 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 RPS14P62263 151 aaKnown RBP21.05■□□□□ 0.96
HDAC4-209ENST00000487617 ATP11AP98196 1134 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 HNRNPA1L2Q32P51 320 aaKnown RBP21.05■□□□□ 0.96
HDAC4-209ENST00000487617 C5orf22Q49AR2 442 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 SYCP2LQ5T4T6 812 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 PEAR1Q5VY43 1037 aaPredicted RBP21.05■□□□□ 0.96
HDAC4-209ENST00000487617 FAM124AQ86V42 546 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 FAM131BQ86XD5 332 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 RGL4Q8IZJ4 473 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 RXFP2Q8WXD0 754 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 PPP1R9BQ96SB3 815 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 TMPRSS4Q9NRS4 437 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 ADAM22Q9P0K1 906 aa21.05■□□□□ 0.96
HDAC4-209ENST00000487617 MUC22E2RYF6 1773 aaPredicted RBP21.05■□□□□ 0.96
HDAC4-209ENST00000487617 CKAP5Q14008 2032 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 TTC34A8MYJ7 566 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 SIN3BO75182 1162 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 GJB6O95452 261 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 DNTTP04053 509 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 CFIP05156 583 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 PLK1P53350 603 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 CDH4P55283 916 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 SULT2A1Q06520 285 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 PTP4A2Q12974 167 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 DUOXA1Q1HG43 343 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 ZNF776Q68DI1 518 aaPredicted RBP21.04■□□□□ 0.96
HDAC4-209ENST00000487617 LRRC31Q6UY01 552 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 BNIPLQ7Z465 357 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 PHF13Q86YI8 300 aaPredicted RBP21.04■□□□□ 0.96
HDAC4-209ENST00000487617 CEP76Q8TAP6 659 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 RPL10LQ96L21 214 aaKnown RBP21.04■□□□□ 0.96
HDAC4-209ENST00000487617 C1orf74Q96LT6 269 aa21.04■□□□□ 0.96
HDAC4-209ENST00000487617 NAP1L5Q96NT1 182 aaPredicted RBP21.04■□□□□ 0.96
HDAC4-209ENST00000487617 CBX8Q9HC52 389 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms