RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 LSM12Q3MHD2 195 aaKnown RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 RAB6CQ53S08 254 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 MTX3Q5HYI7 312 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 HHIPL2Q6UWX4 724 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 SETD3Q86TU7 594 aaPredicted RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 TDRD5Q8NAT2 981 aaKnown RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 MCUQ8NE86 351 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 ADAMTS16Q8TE57 1224 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 ERLEC1Q96DZ1 483 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 NPLQ9BXD5 320 aaPredicted RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 ANKRD60Q9BZ19 345 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 IMPG2Q9BZV3 1241 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 RAB6CQ9H0N0 254 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 CXorf21Q9HAI6 301 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 ANKEF1Q9NU02 776 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 DUS2Q9NX74 493 aaKnown RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 TUBA8Q9NY65 449 aaPredicted RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 CORINQ9Y5Q5 1042 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 SNX13Q9Y5W8 968 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 PSAT1Q9Y617 370 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 GPC6Q9Y625 555 aaPredicted RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 ENDOD1O94919 500 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 ERBB2P04626 1255 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 PMS2P3Q13401 168 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 MOGQ16653 247 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 CYP2A13Q16696 494 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 NHSL2Q5HYW2 709 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 AARS2Q5JTZ9 985 aaKnown RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 SH3PXD2AQ5TCZ1 1133 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 GPR107Q5VW38 600 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 RSBN1LQ6PCB5 846 aaPredicted RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 MAMDC4Q6UXC1 1216 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 ZBTB46Q86UZ6 589 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 SCAIQ8N9R8 606 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 FNIP1Q8TF40 1166 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 CASP10Q92851 521 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 SLCO4A1Q96BD0 722 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 RTP4Q96DX8 246 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 TMA16Q96EY4 203 aaKnown RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 NPAS2Q99743 824 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 PCDHAC1Q9H158 963 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 NOL11Q9H8H0 719 aaKnown RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 ACSS2Q9NR19 701 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 SUN2Q9UH99 717 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 RGPD3A6NKT7 1758 aaPredicted RBP10.88□□□□□ -0.67
CCDC171-208ENST00000486641 RGPD4Q7Z3J3 1758 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 WDR27A2RRH5 827 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 FAM155AB1AL88 458 aaPredicted RBP10.88□□□□□ -0.67
CCDC171-208ENST00000486641 CCNE2O96020 404 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 GNAO1P09471 354 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 CKMT2P17540 419 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 MX2P20592 715 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 NFKBIAP25963 317 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 CRADDP78560 199 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 MRPS9P82933 396 aaKnown RBP10.88□□□□□ -0.67
CCDC171-208ENST00000486641 NIPAL4Q0D2K0 466 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 INSCQ1MX18 579 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 SEZ6Q53EL9 994 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 RC3H1Q5TC82 1133 aaKnown RBP10.88□□□□□ -0.67
CCDC171-208ENST00000486641 TMEM198Q66K66 360 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 SNRNP48Q6IEG0 339 aaKnown RBP10.88□□□□□ -0.67
CCDC171-208ENST00000486641 ANKRD26P1Q6NSI1 321 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 HMBOX1Q6NT76 420 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 PLD6Q8N2A8 252 aaKnown RBP10.88□□□□□ -0.67
CCDC171-208ENST00000486641 ZNF786Q8N393 782 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 PLD5Q8N7P1 536 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 EIF2AQ9BY44 585 aaKnown RBP10.88□□□□□ -0.67
CCDC171-208ENST00000486641 NAA50Q9GZZ1 169 aaKnown RBP10.88□□□□□ -0.67
CCDC171-208ENST00000486641 EFCAB1Q9HAE3 211 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 CISHQ9NSE2 258 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 C20orf96Q9NUD7 363 aaPredicted RBP10.88□□□□□ -0.67
CCDC171-208ENST00000486641 NCKIPSDQ9NZQ3 722 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 GNPTGQ9UJJ9 305 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 PCDHGC3Q9UN70 934 aa10.88□□□□□ -0.67
CCDC171-208ENST00000486641 TESPA1A2RU30 521 aaPredicted RBP10.87□□□□□ -0.67
CCDC171-208ENST00000486641 C9IYK1 514 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 TRIM38O00635 465 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 ALDH1A2O94788 518 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 VAPBO95292 243 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 ATG7O95352 703 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 TYK2P29597 1187 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 CRKP46108 304 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 KPNA1P52294 538 aaPredicted RBP10.87□□□□□ -0.67
CCDC171-208ENST00000486641 TRPC3Q13507 836 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 MTMR1Q13613 665 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 NR1D2Q14995 579 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 FAM47CQ5HY64 1035 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 TTC33Q6PID6 262 aaPredicted RBP10.87□□□□□ -0.67
CCDC171-208ENST00000486641 TMEM26Q6ZUK4 368 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 EEPD1Q7L9B9 569 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 LDHDQ86WU2 507 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 HERC6Q8IVU3 1022 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 SLC7A5P1Q8MH63 180 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 CPSF7Q8N684 471 aaKnown RBP10.87□□□□□ -0.67
CCDC171-208ENST00000486641 SLC15A4Q8N697 577 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 PQLC3Q8N755 202 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 ACER1Q8TDN7 264 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.87□□□□□ -0.67
CCDC171-208ENST00000486641 TFAP2CQ92754 450 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms