RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 GON4LQ3T8J9 2241 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 PI4KAP42356 2102 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 PCDH15Q96QU1 1955 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 SPAARA0A1B0GVQ0 90 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 GRID2IPA4D2P6 1211 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 PIK3R2O00459 728 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 CFIP05156 583 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 CORO1AP31146 461 aaKnown RBP9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 IL12RB1P42701 662 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 PAFAH1B1P43034 410 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 PLA2G4AP47712 749 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 DGKGP49619 791 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 GALCP54803 685 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 SHC2P98077 582 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 CDR2Q01850 454 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 ZNF33AQ06730 810 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 HSF5Q4G112 596 aaPredicted RBP9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 LYSMD4Q5XG99 296 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 TMEM215Q68D42 235 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 CCDC70Q6NSX1 233 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 PIGZQ86VD9 579 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 CACUL1Q86Y37 369 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 SYT12Q8IV01 421 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 LURAP1LQ8IV03 231 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 DENND1CQ8IV53 801 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 UBA3Q8TBC4 463 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 TRIM11Q96F44 468 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 TMEM176AQ96HP8 235 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 MRGPRX1Q96LB2 322 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 CAMK1GQ96NX5 476 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 GABRG3Q99928 467 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 GTPBP2Q9BX10 602 aaKnown RBP9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 ULBP1Q9BZM6 244 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 MARK1Q9P0L2 795 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 SFMBT1Q9UHJ3 866 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 NOCTQ9UK39 431 aaKnown RBP9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 FBXO10Q9UK96 956 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 AGO1Q9UL18 857 aaKnown RBP9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 CNTN6Q9UQ52 1028 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 CAPN6Q9Y6Q1 641 aa9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 ASCC3Q8N3C0 2202 aaKnown RBP9.76□□□□□ -0.85
TMEM39A-208ENST00000486159 GCN1Q92616 2671 aaKnown RBP9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 WDFY3Q8IZQ1 3526 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 SLC12A8A0AV02 714 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 TSPAN3O60637 253 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 MTA2O94776 668 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 MYBL1P10243 752 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 CYP11B1P15538 503 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 H2AFXP16104 143 aaPredicted RBP9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 NOP2P46087 812 aaKnown RBP9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 SGSHP51688 502 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 PDE4CQ08493 712 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 CUL2Q13617 745 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 BRD3Q15059 726 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 ERCC6LQ2NKX8 1250 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 GOLGA7BQ2TAP0 167 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 FUT11Q495W5 492 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 RAB41Q5JT25 222 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 MEI1Q5TIA1 1274 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 DAB2IPQ5VWQ8 1189 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 PEAR1Q5VY43 1037 aaPredicted RBP9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 SLC23A3Q6PIS1 610 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 KIAA1324Q6UXG2 1013 aaKnown RBP9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 SLFN11Q7Z7L1 901 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 TTC39CQ8N584 583 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 ZNF366Q8N895 744 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 TPCN2Q8NHX9 752 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 EPS8L1Q8TE68 723 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 EDEM1Q92611 657 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 KAT5Q92993 513 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 PBKQ96KB5 322 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 SPACA7Q96KW9 195 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 HSPA12BQ96MM6 686 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 XPO6Q96QU8 1125 aaKnown RBP9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 OSBPL9Q96SU4 736 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 ZSWIM1Q9BR11 485 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 MKRN2Q9H000 416 aaKnown RBP9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 WDR35Q9P2L0 1181 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 EVLQ9UI08 416 aaPredicted RBP9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 SALL4Q9UJQ4 1053 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 LSM7Q9UK45 103 aaKnown RBP9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 TFR2Q9UP52 801 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 SLCO1B1Q9Y6L6 691 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 STON1Q9Y6Q2 735 aa9.75□□□□□ -0.85
TMEM39A-208ENST00000486159 GOLGA6L7A0A1B0GV03 622 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 TARSL2A2RTX5 802 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 ENC1O14682 589 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 ATP8B1O43520 1251 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 HYAL3O43820 417 aaPredicted RBP9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 PALMO75781 387 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 PENKP01210 267 aaPredicted RBP9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 RALAP11233 206 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 HLA-EP13747 358 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 PRKCHP24723 683 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 USP8P40818 1118 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 TKTL1P51854 596 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 YWHAGP61981 247 aaKnown RBP eCLIP9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 RPS6KA1Q15418 735 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 TEX35Q5T0J7 233 aa9.74□□□□□ -0.85
TMEM39A-208ENST00000486159 CCDC181Q5TID7 509 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms