RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 RPRD1AQ96P16 312 aaPredicted RBP20.18■□□□□ 0.82
SNX5-213ENST00000486039 C11orf70Q9BRQ4 267 aa20.18■□□□□ 0.82
SNX5-213ENST00000486039 TKTL2Q9H0I9 626 aa20.18■□□□□ 0.82
SNX5-213ENST00000486039 ITM2CQ9NQX7 267 aa20.18■□□□□ 0.82
SNX5-213ENST00000486039 METTL5Q9NRN9 209 aaKnown RBP20.18■□□□□ 0.82
SNX5-213ENST00000486039 TMEM74BQ9NUR3 256 aa20.18■□□□□ 0.82
SNX5-213ENST00000486039 VANGL2Q9ULK5 521 aa20.18■□□□□ 0.82
SNX5-213ENST00000486039 PATE3B3GLJ2 98 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 F9P00740 461 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 CTSOP43234 321 aaPredicted RBP20.17■□□□□ 0.82
SNX5-213ENST00000486039 CLEC16AQ2KHT3 1053 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 PLEKHG6Q3KR16 790 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 C5orf22Q49AR2 442 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 RABGAP1LQ5R372 815 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 TTC39BQ5VTQ0 682 aaPredicted RBP20.17■□□□□ 0.82
SNX5-213ENST00000486039 LYSMD4Q5XG99 296 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 CACUL1Q86Y37 369 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 SLC41A1Q8IVJ1 513 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 EMC1Q8N766 993 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 PRCCQ92733 491 aaPredicted RBP20.17■□□□□ 0.82
SNX5-213ENST00000486039 EDEM2Q9BV94 578 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 SIK2Q9H0K1 926 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 MTG2Q9H4K7 406 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 PRSS16Q9NQE7 514 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 TMPRSS4Q9NRS4 437 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 SNX10Q9Y5X0 201 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 CKAP5Q14008 2032 aa20.17■□□□□ 0.82
SNX5-213ENST00000486039 A0A1B0GTH6 734 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 A0A1B0GVM2 712 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 TCAF2A6NFQ2 919 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 ASLP04424 464 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 C7P10643 843 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 PDGFRAP16234 1089 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 ITPKAP23677 461 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 MZF1P28698 734 aaPredicted RBP20.16■□□□□ 0.82
SNX5-213ENST00000486039 TPMTP51580 245 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 ZNF33AQ06730 810 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 CXorf57Q6NSI4 855 aaKnown RBP20.16■□□□□ 0.82
SNX5-213ENST00000486039 SND1Q7KZF4 910 aaKnown RBP eCLIP20.16■□□□□ 0.82
SNX5-213ENST00000486039 BAP1Q92560 729 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 AGPAT1Q99943 283 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 CBX8Q9HC52 389 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 WSB2Q9NYS7 404 aaPredicted RBP20.16■□□□□ 0.82
SNX5-213ENST00000486039 SUN2Q9UH99 717 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 ERVW-1Q9UQF0 538 aa20.16■□□□□ 0.82
SNX5-213ENST00000486039 ATXN2Q99700 1313 aaKnown RBP20.16■□□□□ 0.82
SNX5-213ENST00000486039 KHNYNO15037 678 aaKnown RBP20.15■□□□□ 0.82
SNX5-213ENST00000486039 MOCS3O95396 460 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 GJB6O95452 261 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 CD6P30203 668 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 NUMBP49757 651 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 FILIP1LQ4L180 1135 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 RAB6CQ53S08 254 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 PEAR1Q5VY43 1037 aaPredicted RBP20.15■□□□□ 0.82
SNX5-213ENST00000486039 IRF2BP2Q7Z5L9 587 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 PHF13Q86YI8 300 aaPredicted RBP20.15■□□□□ 0.82
SNX5-213ENST00000486039 SYT12Q8IV01 421 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 ZNF683Q8IZ20 524 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 OR52K2Q8NGK3 314 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 JOSD2Q8TAC2 188 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 TOE1Q96GM8 510 aaKnown RBP20.15■□□□□ 0.82
SNX5-213ENST00000486039 ZNF419Q96HQ0 510 aaPredicted RBP20.15■□□□□ 0.82
SNX5-213ENST00000486039 RAB6CQ9H0N0 254 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 ADAM22Q9P0K1 906 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 PILRBQ9UKJ0 227 aa20.15■□□□□ 0.82
SNX5-213ENST00000486039 TNRC6BQ9UPQ9 1833 aaKnown RBP20.14■□□□□ 0.81
SNX5-213ENST00000486039 NDUFS2O75306 463 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 CNTN5O94779 1100 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 ENDOD1O94919 500 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 IGLV3-19P01714 112 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 SRPRAP08240 638 aaKnown RBP20.14■□□□□ 0.81
SNX5-213ENST00000486039 FERP16591 822 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 RDXP35241 583 aaKnown RBP20.14■□□□□ 0.81
SNX5-213ENST00000486039 NSFP46459 744 aaKnown RBP20.14■□□□□ 0.81
SNX5-213ENST00000486039 PLK1P53350 603 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 GSCP56915 257 aaPredicted RBP20.14■□□□□ 0.81
SNX5-213ENST00000486039 ST8SIA6P61647 398 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 IRX4P78413 519 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 ATP11AP98196 1134 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 ECT2LQ008S8 904 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 SLC12A1Q13621 1099 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 NR1I3Q14994 352 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 CCDC14Q49A88 953 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 ARTNQ5T4W7 220 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 N4BP2L1Q5TBK1 243 aaPredicted RBP20.14■□□□□ 0.81
SNX5-213ENST00000486039 LUZP1Q86V48 1076 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 KDM1BQ8NB78 822 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 RXFP2Q8WXD0 754 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 ALG14Q96F25 216 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 SEPT11Q9NVA2 429 aaKnown RBP20.14■□□□□ 0.81
SNX5-213ENST00000486039 TMEM51Q9NW97 253 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 SLCO3A1Q9UIG8 710 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 NUP205Q92621 2012 aa20.14■□□□□ 0.81
SNX5-213ENST00000486039 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.13■□□□□ 0.81
SNX5-213ENST00000486039 A0A1W2PQC6 194 aa20.13■□□□□ 0.81
SNX5-213ENST00000486039 LNP1A1A4G5 178 aa20.13■□□□□ 0.81
SNX5-213ENST00000486039 C2CD4BA6NLJ0 364 aa20.13■□□□□ 0.81
SNX5-213ENST00000486039 C4orf47A7E2U8 309 aa20.13■□□□□ 0.81
SNX5-213ENST00000486039 TTC34A8MYJ7 566 aa20.13■□□□□ 0.81
SNX5-213ENST00000486039 CLDN11O75508 207 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms